From b957a2746f4775673b41cec84434bf9217aef6fa Mon Sep 17 00:00:00 2001 From: James Krieger Date: Fri, 29 Nov 2024 12:39:26 +0100 Subject: [PATCH] docs typo fix --- prody/dynamics/anmd.py | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/prody/dynamics/anmd.py b/prody/dynamics/anmd.py index 60b5ac835..a89a55ad0 100755 --- a/prody/dynamics/anmd.py +++ b/prody/dynamics/anmd.py @@ -53,7 +53,9 @@ def runANMD(atoms, num_modes=2, max_rmsd=2., num_steps=2, tolerance=10.0, kwargs of traverseMode can be provided: pos, neg and reverse - :arg atoms: an object with atom and coordinate data + :arg atoms: an object with atom and coordinate data. + This should be a complete atomic model. It is ok to be missing + some side chain atoms and hydrogens, but not fragments, such as loops. :type atoms: :class:`.Atomic` :arg num_modes: number of modes to calculate @@ -76,7 +78,7 @@ def runANMD(atoms, num_modes=2, max_rmsd=2., num_steps=2, tolerance=10.0, Default is 0 :type skip_modes: int - :arg anm: your own NMA modes to ModeSet to use instead + :arg anm: your own NMA modes or ModeSet to use instead Default is None :type anm: :class:`.NMA`, :class:`.ANM`, :class:`.ModeSet`