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    59 repositories

    • tools-mti

      Public
      Python
      •
      MIT License
      •7•3•9•2•Updated Jan 22, 2025Jan 22, 2025

    • ChatAnalysis

      Public
      Chat with your data
      Python
      •
      MIT License
      •0•0•0•0•Updated Jan 22, 2025Jan 22, 2025

    • usegalaxy-tools

      Public
      usegalaxy.* common tools
      Shell
      •
      MIT License
      •54•0•0•0•Updated Jan 9, 2025Jan 9, 2025

    • Galaxy-Ludwig

      Public
      A library of Galaxy deep learning tools based on Ludwig
      HTML
      •
      MIT License
      •1•1•1•0•Updated Jan 7, 2025Jan 7, 2025

    • Galaxy-Pycaret

      Public
      A library of Galaxy-Pycaret -- part of Galaxy ML2 tools
      HTML
      •
      MIT License
      •1•2•2•0•Updated Jan 1, 2025Jan 1, 2025

    • MTIProteinImputation

      Public
      Multiplex Tissue Imaging Protein Imputation
      Python
      •
      MIT License
      •0•1•0•0•Updated Nov 28, 2024Nov 28, 2024

    • pycaret-use-case

      Public
      Use cases for PyCaret
      Jupyter Notebook
      •
      MIT License
      •2•0•0•0•Updated Nov 4, 2024Nov 4, 2024

    • ludwig-use-cases

      Public
      Use cases for Ludwig
      Jupyter Notebook
      •
      MIT License
      •1•0•0•0•Updated Nov 4, 2024Nov 4, 2024

    • HTAN_HR_Figures

      Public
      R
      •0•0•0•0•Updated Aug 28, 2024Aug 28, 2024

    • lab-website

      Public
      Source for Goeckslab website
      HTML
      •
      BSD 3-Clause "New" or "Revised" License
      •1•1•0•0•Updated Aug 13, 2024Aug 13, 2024

    • Galaxy-ML

      Public
      Make machine learning simpler with Galaxy
      HTML
      •
      MIT License
      •7•11•6•1•Updated Jul 16, 2024Jul 16, 2024

    • Spatial_Imputation

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Dec 26, 2023Dec 26, 2023

    • WindowMasker

      Public archive
      Perl
      •
      Academic Free License v3.0
      •4•1•1•1•Updated Dec 16, 2023Dec 16, 2023

    • MarkerIntensityPredictor

      Public
      Python
      •
      MIT License
      •1•3•0•0•Updated Oct 14, 2023Oct 14, 2023

    • sb-galaxy-dockerfile

      Public
      A Dockerfile to test the latest Galaxy with sb-cgc infrastructure
      Dockerfile
      •0•0•2•0•Updated May 23, 2023May 23, 2023

    • Goecks_BGMP

      Public
      Repository for scripts and images for Goecks-BGMP Breast Cancer Image Analysis project
      Python
      •1•0•0•0•Updated Mar 16, 2023Mar 16, 2023

    • Ludwig-ISPY2

      Public archive
      Python
      •0•0•0•1•Updated Mar 7, 2023Mar 7, 2023

    • cloud_tool_graphing

      Public
      Python
      •0•0•3•0•Updated Feb 16, 2023Feb 16, 2023

    • model-unpickler

      Public
      A tool to ensure safely load machine/deep learning models.
      Python
      •
      MIT License
      •0•0•0•0•Updated Nov 17, 2022Nov 17, 2022

    • smart-report

      Public
      A general web report for text, image, interactive plot and so on.
      HTML
      •
      MIT License
      •0•0•0•0•Updated Nov 6, 2022Nov 6, 2022

    • galaxy-image-analysis

      Public
      Galaxy tools for image analysis
      Python
      •
      MIT License
      •17•0•0•0•Updated Sep 15, 2022Sep 15, 2022

    • bioconda-recipes

      Public
      Conda recipes for the bioconda channel.
      Shell
      •
      MIT License
      •3.3k•0•0•0•Updated Jul 19, 2022Jul 19, 2022

    • MTI_report

      Public
      Python
      •0•0•0•0•Updated Jun 8, 2022Jun 8, 2022

    • DigitalPathology

      Public
      0•0•0•0•Updated May 4, 2022May 4, 2022

    • ludwig

      Public
      Data-centric declarative deep learning framework
      Python
      •
      Apache License 2.0
      •1.2k•0•0•0•Updated Apr 8, 2022Apr 8, 2022

    • mcmicro-cwl

      Public
      Common Workflow Language
      •0•0•0•0•Updated Apr 7, 2022Apr 7, 2022

    • alt-galaxy-cancer-playbook

      Public
      Jinja
      •0•0•0•0•Updated Jun 23, 2021Jun 23, 2021

    • galaxy-loader

      Public
      Python
      •0•0•0•0•Updated Jul 1, 2020Jul 1, 2020

    • GOnRampKickStart

      Public
      Ansible playbooks for Galaxy Server deployment
      Python
      •
      Academic Free License v3.0
      •22•1•0•0•Updated Feb 21, 2020Feb 21, 2020

    • G-OnRamp-workflows

      Public
      Academic Free License v3.0
      •0•0•0•0•Updated Oct 3, 2019Oct 3, 2019