[PRE REVIEW]: Pop2net: A Python package for bipartite networks in agent-based simulations

[editorialbot]

Submitting author: @mariuzka (Marius Kaffai)
Repository: https://github.com/mariuzka/pop2net
Branch with paper.md (empty if default branch):
Version: 0.3.0
Editor: Pending
Reviewers: Pending
Managing EiC: Daniel S. Katz

Status

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Author instructions

Thanks for submitting your paper to JOSS @mariuzka. Currently, there isn't a JOSS editor assigned to your paper.

@mariuzka if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). You can search the list of people that have already agreed to review and may be suitable for this submission.

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[editorialbot]

Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

✅ OK DOIs

- 10.1371/journal.pone.0259108 is OK
- 10.1016/j.procs.2015.09.148 is OK
- 10.1007/s43762-022-00034-1 is OK
- 10.18637/jss.v079.i10 is OK
- 10.1177/0049124118769100 is OK
- 10.1007/978-90-481-8927-4_11 is OK
- 10.21105/joss.03065 is OK
- 10.1016/j.softx.2019.02.009 is OK
- 10.1186/s40649-019-0070-5 is OK
- 10.21105/joss.05100 is OK
- 10.1101/2020.05.10.20097469 is OK
- 10.1109/WSC.2015.7408556 is OK

🟡 SKIP DOIs

- No DOI given, and none found for title: Wenn Menschen (keine) Menschen treffen: Simulation...
- No DOI given, and none found for title: Synthpop++: A Hybrid Framework for Generating A Co...
- No DOI given, and none found for title: Utilizing Python for Agent-Based Modeling: The Mes...
- No DOI given, and none found for title: SynthPops: a generative model of human contact net...
- No DOI given, and none found for title: NetLogo

❌ MISSING DOIs

- 10.18564/jasss.4571 may be a valid DOI for title: Social Network Metric-Based Interventions? Experim...
- 10.25080/tcwv9851 may be a valid DOI for title: Exploring Network Structure, Dynamics, and Functio...

❌ INVALID DOIs

- None

[editorialbot]

Software report:

github.com/AlDanial/cloc v 1.98  T=0.11 s (1255.2 files/s, 203998.8 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
Python                          90           2511           1231           7335
Jupyter Notebook                15              0           8686           1143
TeX                              1             19              0            258
YAML                             7             13             48            238
CSV                              3              0              0            111
reStructuredText                13             73             78            104
TOML                             1             12              0            103
Markdown                         2             39              0             91
Text                             1              0              0             78
DOS Batch                        1              8              1             26
INI                              1              2              0             22
CSS                              1              2              4              9
make                             1              4              7              9
-------------------------------------------------------------------------------
SUM:                           137           2683          10055           9527
-------------------------------------------------------------------------------

Commit count by author:

   215	m
   185	Lukas Erhard
   144	mariuzka
    70	Marius Kaffai
    22	MR
     4	luerhard
     3	schorki9
     1	Max Richter
     1	simctbw

[editorialbot]

Paper file info:

📄 Wordcount for paper.md is 1150

✅ The paper includes a Statement of need section

[editorialbot]

License info:

✅ License found: MIT License (Valid open source OSI approved license)

[editorialbot]

👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

[mariuzka]

@mariuzka if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). You can search the list of people that have already agreed to review and may be suitable for this submission.

Hello @editorialbot ,
One potential reviewer could be Joël Foramitti (jofmi), the creator of AgentPy.

[danielskatz]

👋 @mariuzka - thanks for your submission.

1. Can you please work on your README? As you can see in the JOSS review criteria, there should be more content here, such as some explanation of the software, installations instructions, contribution info, etc.

2. Please suggest a few more reviewers, ideally around 5 total, perhaps using the JOSS list if it's helpful

3. Please work on the possibly missing DOIs that editorialbot suggests, but note that some may be incorrect. Please feel free to make changes to your .bib file, then use the command @editorialbot check references to check again, and the command @editorialbot generate pdf when the references are right to make a new PDF. editorialbot commands need to be the first entry in a new comment.

[danielskatz]

👋 @fabian-s - Would you be able to edit this submission?

[danielskatz]

@editorialbot - invite @fabian-s as editor

[editorialbot]

I'm sorry human, I don't understand that. You can see what commands I support by typing:

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[danielskatz]

@editorialbot invite @fabian-s as editor

[editorialbot]

Invitation to edit this submission sent!

[fabian-s]

Sorry @danielskatz, but this is too far out of my area of expertise -- i'm neither a python developer nor do i know anything about agent-based simulations..

[mariuzka]

@editorialbot check references

[editorialbot]

Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

✅ OK DOIs

- 10.18564/jasss.4571 is OK
- 10.1371/journal.pone.0259108 is OK
- 10.1007/s43762-022-00034-1 is OK
- 10.18637/jss.v079.i10 is OK
- 10.1177/0049124118769100 is OK
- 10.1007/978-90-481-8927-4_11 is OK
- 10.21105/joss.03065 is OK
- 10.1016/j.softx.2019.02.009 is OK
- 10.1186/s40649-019-0070-5 is OK
- 10.1016/j.procs.2015.09.148 is OK
- 10.21105/joss.05100 is OK
- 10.25080/tcwv9851 is OK
- 10.1109/WSC.2015.7408556 is OK
- 10.1101/2020.05.10.20097469 is OK

🟡 SKIP DOIs

- No DOI given, and none found for title: Wenn Menschen (keine) Menschen treffen: Simulation...
- No DOI given, and none found for title: Synthpop++: A Hybrid Framework for Generating A Co...
- No DOI given, and none found for title: Utilizing Python for Agent-Based Modeling: The Mes...
- No DOI given, and none found for title: NetLogo
- No DOI given, and none found for title: SynthPops: a generative model of human contact net...

❌ MISSING DOIs

- None

❌ INVALID DOIs

- None

[danielskatz]

👋 @hugoledoux - do you think you could edit this submission?

[danielskatz]

@editorialbot invite @hugoledoux as editor

[editorialbot]

Invitation to edit this submission sent!

[mariuzka]

@editorialbot generate pdf

[editorialbot]

👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

[mariuzka]

2. Please suggest a few more reviewers, ideally around 5 total, perhaps using the JOSS list if it's helpful

👋 @danielskatz,

I would like to suggest the following potential reviewers:

• Joël Foramitti (https://github.com/jofmi)
• Ewout ter Hoeven (https://github.com/EwoutH)
• Brennan Klein (https://github.com/jkbren)
• Jonas Pleyer (https://github.com/jonaspleyer)
• Shuang Song (https://github.com/SongshGeo)
• Janik Muires (https://github.com/janikmu)

[hugoledoux]

@danielskatz I am late for my other ones and flooded with teaching so I'd rather pass on that one. Or if the authors have a lot of patience then I could but not optimal...

[danielskatz]

@mariuzka - I'm going to put this on our waiting list for now until we get an editor who can handle it. We'll be bringing on some new editors soon, or if I finish up something else that I'm working on, I'll take it.