v2.2.5

What's Changed

• TASK-1502 - Individual Browser phenotype and disease filters: search does not restring results by @jmjuanes in #594
• Rga bugfix by @antonioaltamura in #610
• Recessive Variant Browser improvements by @antonioaltamura in #631
• Update Cypress dep to v10, feature-filter fix. by @antonioaltamura in #633
• RGA bugfixes by @antonioaltamura in #648
• Rga bugfix KMDS-1402. by @antonioaltamura in #655
• Rga bugfixes by @antonioaltamura in #661
• Rga improvements by @antonioaltamura in #671
• Rga bugfixes by @antonioaltamura in #673
• Rga bugfixes by @antonioaltamura in #682

Full Changelog: v2.2.3...v2.2.5

v2.9.2

What's Changed

• TASK-4026 - Variant Caller File Filters shown in the Sample Variant Browser are not being recognised and passed to the query when selected by @jmjuanes in #773
• TASK-4512 - Error when building IVA by @jmjuanes in #784
• TASK-4017 - Modifications are not saved when attempting to change the analyst of an already assigned interpretation by @jmjuanes in #771
• TASK-729 - Display genomic location default filter by @jmjuanes in #779
• TASK-2366 - IVA API DOC for sample, individual, cohort, family and file ACL produces wrong REST call by @Rodielm in #776
• TASK-2535 - A locked interpretation has active the edit, clear and delete buttons in the interpretation manager by @Rodielm in #768
• TASK-4057 - IVA REST API is not adding the query params to the requested URL by @Rodielm in #778
• TASK-3841 - IVA REST_APIapp for /analysis/alignment/coverage/qc/geneCoverageStats/run is missing the field "genes" by @Rodielm in #775
• TASK-4490 - Exomiser Tab is empty in Sample Variant Browser by @jmjuanes in #780
• TASK-4449 - Issues with the disorder and proband fields when creating a new case by @jmjuanes in #781
• TASK-4314 - IVA sets cookies without Secure flag by @jmjuanes in #764
• TASK-4030 - Incorrect information displayed in the tooltip of the Full-text search on HPO, ClinVar... filter" by @Rodielm in #789
• TASK-4573 - Family cases are created incorrectly from IVA by @jmjuanes in #791
• TASK-4496 - unable to hide cohorts and population columns in Variant analysis browser by @gpveronica in #790
• TASK-4501 - Create family case modal still uses the old pedigree module and is unable to properly plot families larger than trios by @jmjuanes in #786
• TASK-2562 - Panel creator in IVA does not allow to specify genomic location by @gpveronica in #787

Full Changelog: v2.9.0...v2.9.2

v2.8.3

What's Changed

• TASK-4030 - Incorrect information displayed in the tooltip of the Full-text search on HPO, ClinVar... filter" by @Rodielm in #789
• TASK-4573 - Family cases are created incorrectly from IVA by @jmjuanes in #791
• TASK-4496 - unable to hide cohorts and population columns in Variant analysis browser by @gpveronica in #790
• TASK-4501 - Create family case modal still uses the old pedigree module and is unable to properly plot families larger than trios by @jmjuanes in #786
• TASK-2562 - Panel creator in IVA does not allow to specify genomic location by @gpveronica in #787

Full Changelog: v2.8.2...v2.8.3

v2.9.1

What's Changed

• TASK-4026 - Variant Caller File Filters shown in the Sample Variant Browser are not being recognised and passed to the query when selected by @jmjuanes in #773
• TASK-4512 - Error when building IVA by @jmjuanes in #784
• TASK-4017 - Modifications are not saved when attempting to change the analyst of an already assigned interpretation by @jmjuanes in #771
• TASK-729 - Display genomic location default filter by @jmjuanes in #779
• TASK-2366 - IVA API DOC for sample, individual, cohort, family and file ACL produces wrong REST call by @Rodielm in #776
• TASK-2535 - A locked interpretation has active the edit, clear and delete buttons in the interpretation manager by @Rodielm in #768
• TASK-4057 - IVA REST API is not adding the query params to the requested URL by @Rodielm in #778
• TASK-3841 - IVA REST_APIapp for /analysis/alignment/coverage/qc/geneCoverageStats/run is missing the field "genes" by @Rodielm in #775
• TASK-4490 - Exomiser Tab is empty in Sample Variant Browser by @jmjuanes in #780
• TASK-4449 - Issues with the disorder and proband fields when creating a new case by @jmjuanes in #781
• TASK-4314 - IVA sets cookies without Secure flag by @jmjuanes in #764

Full Changelog: v2.9.0...v2.9.1

v2.8.2

What's Changed

• TASK-4026 - Variant Caller File Filters shown in the Sample Variant Browser are not being recognised and passed to the query when selected by @jmjuanes in #773
• TASK-4512 - Error when building IVA by @jmjuanes in #784
• TASK-4017 - Modifications are not saved when attempting to change the analyst of an already assigned interpretation by @jmjuanes in #771
• TASK-729 - Display genomic location default filter by @jmjuanes in #779
• TASK-2366 - IVA API DOC for sample, individual, cohort, family and file ACL produces wrong REST call by @Rodielm in #776
• TASK-2535 - A locked interpretation has active the edit, clear and delete buttons in the interpretation manager by @Rodielm in #768
• TASK-4057 - IVA REST API is not adding the query params to the requested URL by @Rodielm in #778
• TASK-3841 - IVA REST_APIapp for /analysis/alignment/coverage/qc/geneCoverageStats/run is missing the field "genes" by @Rodielm in #775
• TASK-4490 - Exomiser Tab is empty in Sample Variant Browser by @jmjuanes in #780
• TASK-4449 - Issues with the disorder and proband fields when creating a new case by @jmjuanes in #781
• TASK-4314 - IVA sets cookies without Secure flag by @jmjuanes in #764

Full Changelog: v2.8.1...v2.8.2

v2.9.0

What's Changed

• TASK-1995 - Improve displayed information in Variant Grid by @jmjuanes in #766
• TASK-4281 - Improvements CI/CD jsorolla by @juanfeSanahuja in #772
• TASK-4512 - Error when building IVA (develop) by @jmjuanes in #785

New Contributors

• @juanfeSanahuja made their first contribution in #772

Full Changelog: v2.8.1...v2.9.0

v2.8.1

What's Changed

• TASK-2434 - The ' Show more genes' link in Variant Browser does not display more genes by @jmjuanes in #740
• TASK-4025 - Exomiser interface shows a message saying no phenotypes or disorders are associated with the individual when there are by @jmjuanes in #746
• TASK-4016 - Variant Browser - gnomAD exomes information out of window margin by @jmjuanes in #745
• TASK-4027 - Cohort Stats information displayed in the Sample Variant Browser table doesn't match with the information shown in the Details Tab by @jmjuanes in #752
• TASK-3999 - Gene input area in analysis Sample Variant Stats should have the gene selector active by @jmjuanes in #750
• TASK-4029 - Incorrect number of cosmic studies is shown in the Variant Browser table by @jmjuanes in #751
• TASK-3894 - Virtual files not shown at sample associated files tab by @jmjuanes in #749
• TASK-3767 - Download button of mendelian-errors component does not work by @jmjuanes in #758
• TASK-2441 - Export TSV (Sample Variant Browser) outputs incorrect ACMG prediction values by @Rodielm in #762
• TASK-2504 - RD Tiering form in Case_Interpreter::Interpretation_Methods is not sent when pressing OK button by @jmjuanes in #743
• TASK-2449 - Some variant IDs in the Summary detail tab exceed the web page limits by @jmjuanes in #744
• TASK-2435 - Found IVA queries to cellbase without assembly by @jmjuanes in #759
• TASK-2208 - Gene View interface doesn´t show LOF variants only by @gpveronica in #753
• TASK-2446 - Status and Priority filters in the Job Browser don't allow users to select multiple options by @gpveronica in #747
• TASK-2527 - Disorder attribute in case-interpreter qc-overview detailed tab has raw HTML data by @gpveronica in #754
• TASK-4018 - Adding comments in batches fails from the Review Variant menu (sample variant browser) by @gpveronica in #757
• TASK-2327 - Sample ID missing at Inferred Sex detailed tab in the Individual Browser by @jmjuanes in #760
• TASK-3892 - Unable to add comments to Review Variants in sample variant browser by @gpveronica in #756
• TASK-4028 - Sample/Family Genotypes filter doesn't apply all Inheritance Patterns by @jmjuanes in #748
• TASK-4274 - IVA remains in landing page on reloading by @gpveronica in #769

Full Changelog: v2.8.0...v2.8.1

v2.7.2

What's Changed

• TASK-2434 - The ' Show more genes' link in Variant Browser does not display more genes by @jmjuanes in #740
• TASK-4025 - Exomiser interface shows a message saying no phenotypes or disorders are associated with the individual when there are by @jmjuanes in #746
• TASK-4016 - Variant Browser - gnomAD exomes information out of window margin by @jmjuanes in #745
• TASK-4027 - Cohort Stats information displayed in the Sample Variant Browser table doesn't match with the information shown in the Details Tab by @jmjuanes in #752
• TASK-3999 - Gene input area in analysis Sample Variant Stats should have the gene selector active by @jmjuanes in #750
• TASK-4029 - Incorrect number of cosmic studies is shown in the Variant Browser table by @jmjuanes in #751
• TASK-3894 - Virtual files not shown at sample associated files tab by @jmjuanes in #749
• TASK-3767 - Download button of mendelian-errors component does not work by @jmjuanes in #758
• TASK-2441 - Export TSV (Sample Variant Browser) outputs incorrect ACMG prediction values by @Rodielm in #762
• TASK-2504 - RD Tiering form in Case_Interpreter::Interpretation_Methods is not sent when pressing OK button by @jmjuanes in #743
• TASK-2449 - Some variant IDs in the Summary detail tab exceed the web page limits by @jmjuanes in #744
• TASK-2435 - Found IVA queries to cellbase without assembly by @jmjuanes in #759
• TASK-2208 - Gene View interface doesn´t show LOF variants only by @gpveronica in #753
• TASK-2446 - Status and Priority filters in the Job Browser don't allow users to select multiple options by @gpveronica in #747
• TASK-2527 - Disorder attribute in case-interpreter qc-overview detailed tab has raw HTML data by @gpveronica in #754
• TASK-4018 - Adding comments in batches fails from the Review Variant menu (sample variant browser) by @gpveronica in #757
• TASK-2327 - Sample ID missing at Inferred Sex detailed tab in the Individual Browser by @jmjuanes in #760
• TASK-3892 - Unable to add comments to Review Variants in sample variant browser by @gpveronica in #756
• TASK-4028 - Sample/Family Genotypes filter doesn't apply all Inheritance Patterns by @jmjuanes in #748

Full Changelog: v2.7.1...v2.7.2

v2.4.28

What's Changed

• TASK-2434 - The ' Show more genes' link in Variant Browser does not display more genes by @jmjuanes in #740
• TASK-3894 - Virtual files not shown at sample associated files tab by @jmjuanes in #749
• TASK-3767 - Download button of mendelian-errors component does not work by @jmjuanes in #758
• TASK-2441 - Export TSV (Sample Variant Browser) outputs incorrect ACMG prediction values by @Rodielm in #762
• TASK-2504 - RD Tiering form in Case_Interpreter::Interpretation_Methods is not sent when pressing OK button by @jmjuanes in #743
• TASK-2449 - Some variant IDs in the Summary detail tab exceed the web page limits by @jmjuanes in #744
• TASK-2435 - Found IVA queries to cellbase without assembly by @jmjuanes in #759
• TASK-2208 - Gene View interface doesn´t show LOF variants only by @gpveronica in #753
• TASK-2446 - Status and Priority filters in the Job Browser don't allow users to select multiple options by @gpveronica in #747
• TASK-2527 - Disorder attribute in case-interpreter qc-overview detailed tab has raw HTML data by @gpveronica in #754
• TASK-2327 - Sample ID missing at Inferred Sex detailed tab in the Individual Browser by @jmjuanes in #760

Full Changelog: v2.4.27...v2.4.28

v2.8.0

What's Changed

• TASK-2183 - When creating an interpretation with an automatic method (e.g. Exomiser), show the method in the interpreter summary by @jmjuanes in #739
• TASK-1562 - Pedigree graph with a three-generation family fails to render properly in Family browser detailed tab by @jmjuanes in #738
• TASK-1974 - Support CAS/SAML for authentication and authorization by @jmjuanes in #741
• TASK-3984 - Add XB and CSO logo to IVA for XetaBase customers by @gpveronica in #742
• TASK-3799 - Change IVA Configuration from Admin Interface by @gpveronica in #729
• Task 2168 by @imedina in #763

Full Changelog: v2.7.1...v2.8.0