forked from geneontology/go-ontology
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathtransmembrane_import_into_cell.yaml
34 lines (28 loc) · 1.05 KB
/
transmembrane_import_into_cell.yaml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
pattern_name: transmembrane_import_into_cytosol
# implicitly import into cell across plamsa membrane
classes:
transport: "GO:0006810"
extracellular region: "GO:0005576"
cytosol: "GO:0005829"
chemical entity: "CHEBI:24431" # encompasses protein
macromolecular complex: "GO:0043234" # encompasses protein complex
plasma membrane: "GO:0005886"
relations:
has target start location: "RO:0002338"
has target end location: "RO:0002339"
results in transport across: "RO:0002342"
imports: "RO:0002340"
vars:
imported: "'chemical entity' or 'macromolecular complex'"
name:
text: "%s import across plasma membrane"
vars:
- imported
def:
text: The directed movement of %s from outside of a cell, across the plasma membrane and into the cytoplasmic compartment.
vars:
- imported
equivalentTo:
text: "'transport' and ('has target start location' some 'extracellular region') and ('has target end location' some 'cytosol') and ('results in transport across' some 'plasma membrane') and ('imports' some %s)"
vars:
- imported