scikit-ribo-ext.yml

name: scikit-ribo-ext
channels:
  - conda-forge
  - bioconda
  - defaults
dependencies:
  - _libgcc_mutex=0.1=conda_forge
  - _openmp_mutex=4.5=2_gnu
  - backports=1.1=pyhd3eb1b0_0
  - backports.functools_lru_cache=1.6.5=pyhd8ed1ab_0
  - ca-certificates=2023.05.30=h06a4308_0
  - certifi=2020.6.20=pyhd3eb1b0_3
  - decorator=5.1.1=pyhd8ed1ab_0
  - ipython=5.8.0=py36_1
  - ipython_genutils=0.2.0=py_1
  - ld_impl_linux-64=2.36.1=hea4e1c9_2
  - libffi=3.4.2=h7f98852_5
  - libgcc-ng=12.1.0=h8d9b700_16
  - libgomp=12.1.0=h8d9b700_16
  - libnsl=2.0.0=h7f98852_0
  - libstdcxx-ng=12.1.0=ha89aaad_16
  - libzlib=1.2.12=h166bdaf_0
  - ncurses=6.3=h27087fc_1
  - openssl=1.1.1u=hd590300_0
  - pexpect=4.8.0=pyh1a96a4e_2
  - pickleshare=0.7.5=py_1003
  - pip=21.2.4=pyhd8ed1ab_0
  - prompt_toolkit=1.0.15=py_1
  - ptyprocess=0.7.0=pyhd3deb0d_0
  - pygments=2.12.0=pyhd8ed1ab_0
  - python=3.6.15=hb7a2778_0_cpython
  - python_abi=3.6=2_cp36m
  - readline=8.1=h46c0cb4_0
  - setuptools=49.6.0=py36h5fab9bb_3
  - simplegeneric=0.8.1=py_1
  - six=1.16.0=pyh6c4a22f_0
  - sqlite=3.38.5=h4ff8645_0
  - tk=8.6.12=h27826a3_0
  - traitlets=4.3.3=pyhd8ed1ab_2
  - wcwidth=0.2.6=pyhd8ed1ab_0
  - wheel=0.37.1=pyhd8ed1ab_0
  - xz=5.2.5=h516909a_1
  - zlib=1.2.12=h166bdaf_0
  - pip:
      - argcomplete==2.0.0
      - argh==0.26.2
      - colorama==0.4.4
      - cycler==0.11.0
      - gffutils==0.11.0
      - glmnet-py==0.1.0b2
      - importlib-metadata==4.8.3
      - joblib==1.1.0
      - kiwisolver==1.3.1
      - matplotlib==3.3.4
      - numpy==1.19.5
      - pandas==0.23.0
      - pillow==8.4.0
      - polars==0.12.5
      - pyarrow==6.0.1
      - pybedtools==0.9.0
      - pyfaidx==0.7.0
      - pyfiglet==0.8.post1
      - pyparsing==3.0.9
      - pysam==0.19.1
      - python-dateutil==2.8.2
      - pytz==2022.1
      - scikit-learn==0.24.2
      - scikit-ribo==0.2.4b1
      - scipy==1.5.4
      - seaborn==0.11.2
      - simplejson==3.17.6
      - termcolor==1.1.0
      - threadpoolctl==3.1.0
      - typing-extensions==4.1.1
      - zipp==3.6.0
prefix: /home/drew/bin/conda-install/ScikitRibo_env