From a0a9a8287b2bf2f0beed4fa545d311ba394df196 Mon Sep 17 00:00:00 2001 From: Leigh Carmody Date: Thu, 25 Jul 2024 09:33:31 -0400 Subject: [PATCH 1/6] added streptococcus screening and rapid strep test. close #607 --- src/ontology/maxo-edit.owl | 22 +++++++++++++++++++++- 1 file changed, 21 insertions(+), 1 deletion(-) diff --git a/src/ontology/maxo-edit.owl b/src/ontology/maxo-edit.owl index 75185227..349fd9fd 100644 --- a/src/ontology/maxo-edit.owl +++ b/src/ontology/maxo-edit.owl @@ -985,6 +985,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -11420,6 +11422,24 @@ AnnotationAssertion(dce:date "2024 AnnotationAssertion(rdfs:label "removal of kidney cysts") SubClassOf( ) +# Class: (streptococcus screening) + +AnnotationAssertion( "A test to detect streptococcus, either Group A or Group B, in a patient.") +AnnotationAssertion(dce:creator ) +AnnotationAssertion(dce:date "2024-07-25T13:29:02Z"^^xsd:dateTime) +AnnotationAssertion(rdfs:label "streptococcus screening") +SubClassOf( ) + +# Class: (rapid strep test) + +AnnotationAssertion( "A rapid antigen detection test to diagnose bacterial pharyngitis caused by group A streptococci.") +AnnotationAssertion(dce:creator ) +AnnotationAssertion(dce:date "2024-07-25T13:30:48Z"^^xsd:dateTime) +AnnotationAssertion( "RST") +AnnotationAssertion( "strep throat rapid test") +AnnotationAssertion(rdfs:label "rapid strep test") +SubClassOf( ) + # Class: (preimplantation genetic testing) AnnotationAssertion(Annotation( "NCBIBook:NBK5191") "Genetic testing of one or more cells removed from early embryos conceived by in vitro fertilization and transferring to the mother's uterus only those embryos determined not to have the pathogenic variant(s)/chromosome anomaly(ies) of concern.") @@ -12833,5 +12853,5 @@ AnnotationAssertion(dcterms:creator "2023-04-11T12:00:00Z") AnnotationAssertion(dcterms:contributor ) AnnotationAssertion(dcterms:creator ) -AnnotationAssertion( _:genid2147483649 "") +AnnotationAssertion( _:genid2147483650 "") ) \ No newline at end of file From da523e3851f7ce040164a0e7206501cd301666b8 Mon Sep 17 00:00:00 2001 From: Leigh Carmody Date: Thu, 25 Jul 2024 09:35:22 -0400 Subject: [PATCH 2/6] added depth perception asseessment close #601 --- src/ontology/maxo-edit.owl | 10 ++++++++++ 1 file changed, 10 insertions(+) diff --git a/src/ontology/maxo-edit.owl b/src/ontology/maxo-edit.owl index 349fd9fd..cca1975f 100644 --- a/src/ontology/maxo-edit.owl +++ b/src/ontology/maxo-edit.owl @@ -987,6 +987,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -11440,6 +11441,15 @@ AnnotationAssertion( "rapid strep test") SubClassOf( ) +# Class: (depth perception assessment) + +AnnotationAssertion(dce:creator ) +AnnotationAssertion(dce:date "2024-07-25T13:34:10Z"^^xsd:dateTime) +AnnotationAssertion( "https://my.clevelandclinic.org/health/body/24956-depth-perception") +AnnotationAssertion( "A diagnostic procedure used to evaluate an individual's ability to perceive and judge the relative distances of objects in the three-dimensional world.") +AnnotationAssertion(rdfs:label "depth perception assessment") +SubClassOf( ) + # Class: (preimplantation genetic testing) AnnotationAssertion(Annotation( "NCBIBook:NBK5191") "Genetic testing of one or more cells removed from early embryos conceived by in vitro fertilization and transferring to the mother's uterus only those embryos determined not to have the pathogenic variant(s)/chromosome anomaly(ies) of concern.") From 9a16b2b90cfbc105a815132d890227aa32a21e54 Mon Sep 17 00:00:00 2001 From: Leigh Carmody Date: Thu, 25 Jul 2024 09:39:14 -0400 Subject: [PATCH 3/6] added sensory integration therapy --- src/ontology/maxo-edit.owl | 9 +++++++++ 1 file changed, 9 insertions(+) diff --git a/src/ontology/maxo-edit.owl b/src/ontology/maxo-edit.owl index cca1975f..f009c576 100644 --- a/src/ontology/maxo-edit.owl +++ b/src/ontology/maxo-edit.owl @@ -988,6 +988,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -11450,6 +11451,14 @@ AnnotationAssertion( "depth perception assessment") SubClassOf( ) +# Class: (sensory integration therapy) + +AnnotationAssertion(dce:creator ) +AnnotationAssertion(dce:date "2024-07-25T13:36:29Z"^^xsd:dateTime) +AnnotationAssertion( "Therapy that helps with processing, integrating or organizing sensory information of the body.") +AnnotationAssertion(rdfs:label "sensory integration therapy") +SubClassOf( ) + # Class: (preimplantation genetic testing) AnnotationAssertion(Annotation( "NCBIBook:NBK5191") "Genetic testing of one or more cells removed from early embryos conceived by in vitro fertilization and transferring to the mother's uterus only those embryos determined not to have the pathogenic variant(s)/chromosome anomaly(ies) of concern.") From 341ff8b2f3074261deb75fdbd1935ff6fc2b81bd Mon Sep 17 00:00:00 2001 From: Leigh Carmody Date: Thu, 25 Jul 2024 09:51:09 -0400 Subject: [PATCH 4/6] added tape tripping procedure --- src/ontology/maxo-edit.owl | 9 +++++++++ 1 file changed, 9 insertions(+) diff --git a/src/ontology/maxo-edit.owl b/src/ontology/maxo-edit.owl index f009c576..8279ce52 100644 --- a/src/ontology/maxo-edit.owl +++ b/src/ontology/maxo-edit.owl @@ -989,6 +989,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -11459,6 +11460,14 @@ AnnotationAssertion( "sensory integration therapy") SubClassOf( ) +# Class: (tape stripping procedure) + +AnnotationAssertion(Annotation( "https://www.sciencedirect.com/science/article/pii/S0022202X2100021X") "Collection of stratum corneum samples by applying adhesive tape to the skin.") +AnnotationAssertion(dce:creator ) +AnnotationAssertion(dce:date "2024-07-25T13:49:51Z"^^xsd:dateTime) +AnnotationAssertion(rdfs:label "tape stripping procedure") +SubClassOf( ) + # Class: (preimplantation genetic testing) AnnotationAssertion(Annotation( "NCBIBook:NBK5191") "Genetic testing of one or more cells removed from early embryos conceived by in vitro fertilization and transferring to the mother's uterus only those embryos determined not to have the pathogenic variant(s)/chromosome anomaly(ies) of concern.") From 3dab955b157d06010c88909bc0b48bd62e1eb362 Mon Sep 17 00:00:00 2001 From: Leigh Carmody Date: Thu, 25 Jul 2024 09:55:45 -0400 Subject: [PATCH 5/6] added sleep apnea treatment #593 --- src/ontology/maxo-edit.owl | 9 +++++++++ 1 file changed, 9 insertions(+) diff --git a/src/ontology/maxo-edit.owl b/src/ontology/maxo-edit.owl index 8279ce52..161b187b 100644 --- a/src/ontology/maxo-edit.owl +++ b/src/ontology/maxo-edit.owl @@ -990,6 +990,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -11468,6 +11469,14 @@ AnnotationAssertion(dce:date "2024 AnnotationAssertion(rdfs:label "tape stripping procedure") SubClassOf( ) +# Class: (sleep apnea treatment) + +AnnotationAssertion(Annotation( "https://www.nhlbi.nih.gov/health/sleep-apnea/treatment") "An intervention, e.g. a breathing or oral device, to help keep a person's airways open while they sleep.") +AnnotationAssertion(dce:creator ) +AnnotationAssertion(dce:date "2024-07-25T13:54:29Z"^^xsd:dateTime) +AnnotationAssertion(rdfs:label "sleep apnea treatment") +SubClassOf( ) + # Class: (preimplantation genetic testing) AnnotationAssertion(Annotation( "NCBIBook:NBK5191") "Genetic testing of one or more cells removed from early embryos conceived by in vitro fertilization and transferring to the mother's uterus only those embryos determined not to have the pathogenic variant(s)/chromosome anomaly(ies) of concern.") From 6eeb8fd062adcd5ea7f8589fee2d90ea1edcfbb2 Mon Sep 17 00:00:00 2001 From: Leigh Carmody Date: Thu, 25 Jul 2024 10:01:55 -0400 Subject: [PATCH 6/6] fixed definition error. close #607 close #601 close #600 close #594 close #593 --- src/ontology/maxo-edit.owl | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/src/ontology/maxo-edit.owl b/src/ontology/maxo-edit.owl index 161b187b..652c9bc3 100644 --- a/src/ontology/maxo-edit.owl +++ b/src/ontology/maxo-edit.owl @@ -11446,18 +11446,18 @@ SubClassOf( (depth perception assessment) +AnnotationAssertion( "A diagnostic procedure used to evaluate an individual's ability to perceive and judge the relative distances of objects in the three-dimensional world.") AnnotationAssertion(dce:creator ) AnnotationAssertion(dce:date "2024-07-25T13:34:10Z"^^xsd:dateTime) AnnotationAssertion( "https://my.clevelandclinic.org/health/body/24956-depth-perception") -AnnotationAssertion( "A diagnostic procedure used to evaluate an individual's ability to perceive and judge the relative distances of objects in the three-dimensional world.") AnnotationAssertion(rdfs:label "depth perception assessment") SubClassOf( ) # Class: (sensory integration therapy) +AnnotationAssertion( "Therapy that helps with processing, integrating or organizing sensory information of the body.") AnnotationAssertion(dce:creator ) AnnotationAssertion(dce:date "2024-07-25T13:36:29Z"^^xsd:dateTime) -AnnotationAssertion( "Therapy that helps with processing, integrating or organizing sensory information of the body.") AnnotationAssertion(rdfs:label "sensory integration therapy") SubClassOf( )