diff --git a/config/nxf_call_str.config b/config/nxf_call_str.config
index 8cb2371b3..a95608727 100644
--- a/config/nxf_call_str.config
+++ b/config/nxf_call_str.config
@@ -2,7 +2,7 @@ includeConfig 'nxf.config'
 
 env {
   CMD_EXPANSIONHUNTER = "apptainer exec --no-mount home --bind \${TMPDIR} ${APPTAINER_CACHEDIR}/expansionhunter-5.0.0.sif ExpansionHunter"
-  CMD_STRAGLR="apptainer exec --no-mount home --bind \${TMPDIR} ${APPTAINER_CACHEDIR}/straglr-philres-1.4.2.sif straglr-genotype"
+  CMD_STRAGLR="apptainer exec --no-mount home --bind \${TMPDIR} ${APPTAINER_CACHEDIR}/straglr-1.4.4_vip_v1.sif straglr-genotype"
 }
 
 params {
diff --git a/docs/usage/workflow.md b/docs/usage/workflow.md
index 0f24ee2a0..64e39cf1b 100644
--- a/docs/usage/workflow.md
+++ b/docs/usage/workflow.md
@@ -22,7 +22,7 @@ The `cram` workflow consists of the following steps:
 2. Create validated, indexed `.bam` file from `bam/cram/sam` input
 3. Discover short tandem repeats and publish as intermediate result.
     1. Using [ExpansionHunter](https://github.com/Illumina/ExpansionHunter) for Illumina short read data.
-    2. Using this [fork of Straglr](https://github.com/philres/straglr) for PacBio and Nanopore long read data, this fork is chosen over the original [Straglr](https://github.com/bcgsc/straglr) because of the VCF output that enables VIP to combine it with the SV and SNV data in the VCF workflow.
+    2. Using this [fork of Straglr](https://github.com/molgenis/straglr) for PacBio and Nanopore long read data, this is a fork of this fork(https://github.com/philres/straglr) and is chosen over the original [Straglr](https://github.com/bcgsc/straglr) because of the VCF output that enables VIP to combine it with the SV and SNV data in the VCF workflow.
 4. Parallelize cram in chunks consisting of one or more contigs and for each chunk
     1. Perform short variant calling with [DeepVariant](https://github.com/google/deepvariant) producing a `gvcf` file per chunk per sample, the gvcfs of the samples in a project are than merged to one vcf per project (using [GLnexus](https://github.com/dnanexus-rnd/GLnexus).
     2. Perform structural variant calling with [Manta](https://github.com/Illumina/manta) or [cuteSV](https://github.com/tjiangHIT/cuteSV) producing a `vcf` file per chunk per project.
@@ -58,4 +58,4 @@ The `vcf` workflow consists of the following steps:
 5. If `cram` data is available slice the `cram` files to only keep relevant reads
 6. Create report
 
-For details, see [here](https://github.com/molgenis/vip/blob/main/vip_vcf.nf).
\ No newline at end of file
+For details, see [here](https://github.com/molgenis/vip/blob/main/vip_vcf.nf).
diff --git a/install.sh b/install.sh
index 84257c8bd..de3a57383 100755
--- a/install.sh
+++ b/install.sh
@@ -82,7 +82,7 @@ download_files() {
   urls+=("7486bd5de526d9888df8eea2d8bdea48" "images/minimap2-2.27.sif")
   urls+=("06ac8a76a307fa42fffd80ab906fd24b" "images/picard-3.1.1.sif")
   urls+=("9a4b685b26744113d3ea0a3904c02706" "images/samtools-1.17-patch1.sif")
-  urls+=("2c18fcda2660792a7c8ba390463ae7ac" "images/straglr-philres-1.4.2.sif")
+  urls+=("d16851058e57ca08417f212b129841ca" "images/straglr-1.4.4_vip_v1.sif")
   urls+=("bcc157242cd9b09c66f015c52ef2d61d" "images/stranger-0.8.1.sif")
   urls+=("4fbbd8642ead7754cb8cc19740e18175" "images/vcf-decision-tree-4.0.0.sif")
   urls+=("9c4d7b48138f29651cdd45eb8d0cc4b6" "images/vcf-inheritance-matcher-3.1.0.sif")
diff --git a/modules/cram/straglr.nf b/modules/cram/straglr.nf
index 3d9e0a49b..cefe0fd1b 100644
--- a/modules/cram/straglr.nf
+++ b/modules/cram/straglr.nf
@@ -6,7 +6,7 @@ process straglr_call {
   input:
     tuple val(meta), path(cram), path(cramCrai)
   output:
-    tuple val(meta), path(vcfOut), path(vcfOutIndex), path(vcfOutStats)
+    tuple val(meta), path(tsvOut), path(vcfOut), path(vcfOutIndex), path(vcfOutStats)
   shell:
     paramReference = params[meta.project.assembly].reference.fasta
     paramReferenceFai = params[meta.project.assembly].reference.fastaFai
@@ -17,6 +17,7 @@ process straglr_call {
     sampleSex = meta.sample.sex
 
     vcfOut = "${meta.project.id}_${meta.sample.family_id}_${meta.sample.individual_id}_str.vcf.gz"
+    tsvOut = "${meta.project.id}_${meta.sample.family_id}_${meta.sample.individual_id}_str.tsv"
     vcfOutIndex = "${vcfOut}.csi"
     vcfOutStats = "${vcfOut}.stats"
     
diff --git a/modules/cram/templates/straglr_call.sh b/modules/cram/templates/straglr_call.sh
index 6afe4899b..f7927ee02 100644
--- a/modules/cram/templates/straglr_call.sh
+++ b/modules/cram/templates/straglr_call.sh
@@ -6,6 +6,7 @@ call_short_tandem_repeats () {
     args+=("--loci" "!{paramLoci}")
     args+=("--sample" "!{sampleId}")
     args+=("--vcf" "straglr.vcf")
+    args+=("--tsv" "!{tsvOut}")
     if [ -z "!{sampleSex}" ]; then
         args+=("--sex" "!{sampleSex}")
     fi
diff --git a/subworkflows/call_str.nf b/subworkflows/call_str.nf
index 7292d9120..760a77360 100644
--- a/subworkflows/call_str.nf
+++ b/subworkflows/call_str.nf
@@ -48,7 +48,7 @@ workflow str {
     ch_str_by_platform.straglr
       | map { meta -> [meta, meta.sample.cram.data, meta.sample.cram.index] }
       | straglr_call
-      | map { meta, vcf, vcfIndex, vcfStats -> [meta, [data: vcf, index: vcfIndex, stats: vcfStats]] }
+      | map { meta, tsv, vcf, vcfIndex, vcfStats -> [meta, [data: vcf, index: vcfIndex, stats: vcfStats]] }
       | set { ch_str_straglr }
 
     // group by project
diff --git a/utils/apptainer/build.sh b/utils/apptainer/build.sh
index 1906eb4cb..7f6b78d33 100644
--- a/utils/apptainer/build.sh
+++ b/utils/apptainer/build.sh
@@ -93,7 +93,7 @@ main() {
   images+=("picard-3.1.1")
   images+=("samtools-1.17-patch1")
   images+=("stranger-0.8.1")
-  images+=("straglr-philres-1.4.2")
+  images+=("straglr-1.4.4_vip_v1")
   images+=("vcf-decision-tree-4.0.0")
   images+=("vcf-inheritance-matcher-3.1.0")
   images+=("vcf-report-6.0.1")
diff --git a/utils/apptainer/def/straglr-philres-1.4.2.def b/utils/apptainer/def/straglr-1.4.4_vip_v1.def
similarity index 76%
rename from utils/apptainer/def/straglr-philres-1.4.2.def
rename to utils/apptainer/def/straglr-1.4.4_vip_v1.def
index 4cdaf2e54..9b876c9f8 100644
--- a/utils/apptainer/def/straglr-philres-1.4.2.def
+++ b/utils/apptainer/def/straglr-1.4.4_vip_v1.def
@@ -11,8 +11,8 @@ From: sif/build/ubuntu-22.04.sif
     curl -Ls -o /opt/trf/trf "https://github.com/Benson-Genomics-Lab/TRF/releases/download/v4.09.1/trf409.linux64"
     chmod +x /opt/trf/trf
 
-    # ce7d96cad4630d6a73114657e082f2402b1b1213 = v1.4.2
-    pip install git+https://github.com/philres/straglr.git@ce7d96cad4630d6a73114657e082f2402b1b1213#egg=straglr
+    #b894775d2917c4c36b29c256e7db977a12f56e57 == v1.4.4_vip_v1
+    pip install git+https://github.com/molgenis/straglr.git@b894775d2917c4c36b29c256e7db977a12f56e57#egg=straglr
 
     # cleanup
     pip cache purge