-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathHeart.mdxv
executable file
·2902 lines (2880 loc) · 62.9 KB
/
Heart.mdxv
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
// Parameters for MorphoDynamX
[Main]
MDXVersion: 2.0
MDXRevision: 2-613-g46128500-dirty
ClearColor: 0
SurfOffset: 0.01
Slices: 1024
ScreenSampling: 1
TileCount: 20
MaxTexSize: 1024 1024 1024
DrawNormals: 0
DrawOffset: 1
DrawZeroLabels: 0
DrawNhbds: 0
DeleteBadVertex: false
CudaHoldMem: 0
MeshPointSize: 3
MeshLineWidth: 1
SeedStack: false
VoxelEditRadius: 25
VoxelEditMaxPix: 1024000
[Labels]
Color: 1 0 0 1
Color: 0 1 0 1
Color: 1 0 0 1
Color: 1 1 0 1
Color: 1 0 1 1
Color: 0 1 1 1
Color: 0.5 0 0 1
Color: 0 0.5 0 1
Color: 0 0 0.5 1
Color: 0.5 0 0.5 1
Color: 0.5 0.5 0 1
Color: 1 0 0.5 1
Color: 0.5 0.5 1 1
Color: 0 0.5 1 1
Color: 0.5 0 1 1
Color: 1 0.5 0 1
[Colors]
GeneralBackground: 0 0 0 1
GeneralClippingPlane1: 0.913725 0.913725 0.913725 1
GeneralClippingPlane2: 0.913725 0.913725 0.913725 1
GeneralClippingPlane3: 0.913725 0.913725 0.913725 1
GeneralCuttingSurface: 0.913725 0.913725 0.913725 1
GeneralLegend: 1 1 1 1
GeneralScaleBar: 1 1 1 1
GeneralEditedpixels: 1 1 1 1
Stack1Mesh: 1 1 0 1
Stack1Border: 0 1 1 1
Stack1Selection: 1 0 0 1
Stack1Celllabels: 1 1 1 1
Stack1StackBoundingBox: 0.501961 0.501961 0.501961 1
Stack2Mesh: 1 1 0 1
Stack2Border: 0 1 1 1
Stack2Selection: 1 0 0 1
Stack2Celllabels: 1 1 1 1
Stack2StackBoundingBox: 0.501961 0.501961 0.501961 1
[Main]
DrawClipBox: false
Spinning: 10000
FlySpeed: 0.005
Brightness: 0
Contrast: 1
Shininess: 32
Specular: 0.2
UnsharpStrength: 1
MaxNbPeels: 10
CameraFrame: 1 2.82109e-32 -8.74512e-18 0 -2.91818e-32 1 -1.11022e-16 0 8.74512e-18 1.11022e-16 1 0 2.86965 4.31261 -328.905 1
SceneRadius: 500
CameraZoom: 0.48
[Clip1]
Enable: false
Grid: false
Width: 0.674185
GridSize: 1
GridSquares: 3
GridColor: 11
Normal: 1 0 0
Frame: 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1
[Clip2]
Enable: false
Grid: false
Width: 0.674185
GridSize: 1
GridSquares: 3
GridColor: 12
Normal: 0 1 0
Frame: 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1
[Clip3]
Enable: false
Grid: false
Width: 0.674185
GridSize: 1
GridSquares: 3
GridColor: 13
Normal: 0 0 1
Frame: 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1
[Stack1]
StackFile:
WorkStackFile:
MeshFile: Heart.mdxm
MainShow: false
MainBright:1
MainOpacity:0.8
Main16Bit:false
MainLabels:false
WorkShow: false
WorkBright:1
WorkOpacity:0.8
Work16Bit:false
WorkLabels:false
SurfBright:1
SurfOpacity:0.9994
SurfBlend:false
SurfCull:false
SurfShade:true
ShowTrans:true
ShowBBox:true
ShowScale:false
TieScales:true
ScaleX:1
ScaleY:1
ScaleZ:1
Scale:1.73205
LoadMeshScaleUm: true
LoadMeshTransform: false
MeshShift: 0
CCName: Tissue
MainColorMap: Interpolation:\srgb\nClamp:\strue\nExteriorColor:\s0,0,0,0\nColoredPos:\s0-0,0,0,0\nColoredPos:\s1-0,1,0,1\n
WorkColorMap: Interpolation:\srgb\nClamp:\strue\nExteriorColor:\s0,0,0,0\nColoredPos:\s0-0,0,0,0\nColoredPos:\s1-0,1,1,1\n
Frame: 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1
Trans: 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1
[Stack2]
StackFile:
WorkStackFile:
MeshFile:
MainShow: false
MainBright:1
MainOpacity:0.8
Main16Bit:false
MainLabels:false
WorkShow: false
WorkBright:1
WorkOpacity:0.8
Work16Bit:false
WorkLabels:false
SurfBright:1
SurfOpacity:1
SurfBlend:false
SurfCull:true
SurfShade:true
ShowTrans:false
ShowBBox:false
ShowScale:false
TieScales:true
ScaleX:1
ScaleY:1
ScaleZ:1
Scale:1.73205
LoadMeshScaleUm: true
LoadMeshTransform: false
MeshShift: 0
CCName:
MainColorMap: Interpolation:\srgb\nClamp:\strue\nExteriorColor:\s0,0,0,0\nColoredPos:\s0-0,0,0,0\nColoredPos:\s1-1,0,0,1\n
WorkColorMap: Interpolation:\srgb\nClamp:\strue\nExteriorColor:\s0,0,0,0\nColoredPos:\s0-0,0,0,0\nColoredPos:\s1-1,1,0,1\n
Frame: 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1
Trans: 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1
[Plane]
DrawCutSurf: false
Mode: 0
CutSurfGrid: false
Material: 0
Size: 1.05185 1.05185 1.05185
SurfSize: 15 15
LineWidth: 1
BezPoints: 5 5
Frame: 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1
BezPointList: -7.5 -7.5 0
BezPointList: -3.75 -7.5 0
BezPointList: 0 -7.5 0
BezPointList: 3.75 -7.5 0
BezPointList: 7.5 -7.5 0
BezPointList: -7.5 -3.75 0
BezPointList: -3.75 -3.75 0
BezPointList: 0 -3.75 0
BezPointList: 3.75 -3.75 0
BezPointList: 7.5 -3.75 0
BezPointList: -7.5 0 0
BezPointList: -3.75 0 0
BezPointList: 0 0 0
BezPointList: 3.75 0 0
BezPointList: 7.5 0 0
BezPointList: -7.5 3.75 0
BezPointList: -3.75 3.75 0
BezPointList: 0 3.75 0
BezPointList: 3.75 3.75 0
BezPointList: 7.5 3.75 0
BezPointList: -7.5 7.5 0
BezPointList: -3.75 7.5 0
BezPointList: 0 7.5 0
BezPointList: 3.75 7.5 0
BezPointList: 7.5 7.5 0
[ScaleBar]
AutoScale: true
Unit:m
MinSize: 50
MaxSize: 200
AutoUnit: true
Position: BottomRight
Direction: Horizontal
TextPosition: Out
Thickness: 5
ShiftBorder: 20 20
FontSize: 12
[ColorBar]
ScaleLength: 0.3
Width: 20
DistanceToBorder: 5
TextToBar: 5
TickSize: 2
ExpSize: 0.7
Epsilon: 1e-09
LineWidth: 2
Position: TopLeft
FontSize: 10
Orientation: Vertical
[Process]
ProcessName: Mesh/Attributes/Manage Attributes
NumParms: 1
ParmName: Mesh Id
ParmString: 0
ProcessName: Mesh/Attributes/Save Attributes to CSV
NumParms: 1
ParmName: Filename
ParmString:
ProcessName: Mesh/Axis/Clear Axis Attribute
NumParms: 2
ParmName: Axis Name
ParmString:
ParmName: Erase All
ParmString: All
ProcessName: Mesh/Axis/Load Axis Attribute
NumParms: 2
ParmName: Axis Name
ParmString:
ParmName: Input File
ParmString:
ProcessName: Mesh/Axis/Save Axis Attribute
NumParms: 2
ParmName: Axis Name
ParmString:
ParmName: Output File
ParmString:
ProcessName: Mesh/Axis/Set Axis Line Width
NumParms: 2
ParmName: Axis Name
ParmString:
ParmName: Width
ParmString: 2.0
ProcessName: Mesh/Cell Axis/Cell Axis Load
NumParms: 2
ParmName: Type
ParmString: PDG
ParmName: Input File
ParmString:
ProcessName: Mesh/Cell Axis/Cell Axis Save
NumParms: 1
ParmName: Output File
ParmString:
ProcessName: Mesh/Cell Axis/Fibril Orientations
NumParms: 5
ParmName: Border Size
ParmString: 1.0
ParmName: Min Ratio
ParmString: 0.25
ParmName: Blur Radius
ParmString: 1.0
ParmName: Scale
ParmString: 10.0
ParmName: Axis Name
ParmString: Fibril Orientation
ProcessName: Mesh/Cell Axis/Shape Analysis/Compute PCA 2D
NumParms: 5
ParmName: Display
ParmString: Ratio
ParmName: Heat Name
ParmString: PCA 2D
ParmName: Scale
ParmString: 2.0
ParmName: Line Width
ParmString: 2.0
ParmName: PCA Attribute
ParmString: PCA 2D
ProcessName: Mesh/Creation/Extrude Faces
NumParms: 2
ParmName: Complex Name Out
ParmString:
ParmName: Distance
ParmString: 1.0
ProcessName: Mesh/Creation/Extrude Triangles Parallel
NumParms: 4
ParmName: Complex Name
ParmString:
ParmName: Complex Name Out
ParmString:
ParmName: Distance
ParmString: 1.0
ParmName: Scaling
ParmString: 1.0
ProcessName: Mesh/Creation/Marching Cubes Surface
NumParms: 2
ParmName: Cube Size
ParmString: 5.0
ParmName: Threshold
ParmString: 5000
ProcessName: Mesh/Creation/Mesh Cutting Surface
NumParms: 0
ProcessName: Mesh/Heat Map/Heat Map
NumParms: 10
ParmName: Measure
ParmString: Geometry/Area
ParmName: Force Recalc
ParmString: Yes
ParmName: Change Map
ParmString: No
ParmName: Change Dir
ParmString: Increasing
ParmName: Change Type
ParmString: Ratio
ParmName: Growth Time
ParmString: 0.0001
ParmName: Custom Range
ParmString: No
ParmName: Range Min
ParmString: 0.0
ParmName: Range Max
ParmString: 1.0
ParmName: Heat Map
ParmString:
ProcessName: Mesh/Heat Map/Measures2D/Geometry/Area
NumParms: 1
ParmName: Heat Name
ParmString: Area
ProcessName: Mesh/Heat Map/Measures2D/Geometry/Neighbors
NumParms: 1
ParmName: Heat Name
ParmString: Neighbors
ProcessName: Mesh/Heat Map/Measures2D/Geometry/Perimeter
NumParms: 1
ParmName: Heat Name
ParmString: Perimeter
ProcessName: Mesh/Heat Map/Measures2D/Location/Associated Bezier X
NumParms: 1
ParmName: Heat Name
ParmString: Cell Wall Heat
ProcessName: Mesh/Heat Map/Measures2D/Location/Cell Distance
NumParms: 2
ParmName: Heat Name
ParmString: Cell Distance
ParmName: Wall Weights
ParmString: 1
ProcessName: Mesh/Heat Map/Measures2D/Shape/Bending
NumParms: 1
ParmName: Heat Name
ParmString: Bending
ProcessName: Mesh/Heat Map/Measures2D/Signal/Average
NumParms: 2
ParmName: Heat Name
ParmString: Average
ParmName: Signal
ParmString:
ProcessName: Mesh/Heat Map/Measures2D/Signal/Total
NumParms: 2
ParmName: Heat Name
ParmString: Total
ParmName: Signal
ParmString:
ProcessName: Mesh/Heat Map/Measures3D/Geometry/Cell Wall Area
NumParms: 1
ParmName: Heat Name
ParmString: Cell Wall Area
ProcessName: Mesh/Heat Map/Measures3D/Geometry/Volume
NumParms: 1
ParmName: Heat Name
ParmString: Volume
ProcessName: Mesh/Heat Map/Measures3D/Location/Associated Bezier X
NumParms: 1
ParmName: Heat Name
ParmString: Associated Bezier X
ProcessName: Mesh/Heat Map/Measures3D/Location/Distance To Bezier
NumParms: 2
ParmName: Heat Name
ParmString: Distance To Bezier
ParmName: Bezier Line
ParmString: No
ProcessName: Mesh/Heat Map/Measures3D/Location/Distance To Mesh
NumParms: 1
ParmName: Heat Name
ParmString: Distance To Mesh
ProcessName: Mesh/Heat Map/Measures3D/Signal/Average
NumParms: 2
ParmName: Heat Name
ParmString: Average
ParmName: Signal
ParmString:
ProcessName: Mesh/Heat Map/Measures3D/Signal/Total
NumParms: 2
ParmName: Heat Name
ParmString: Total
ParmName: Signal
ParmString:
ProcessName: Mesh/Heat Map/Measures3D/Test/Distance Attr Maps
NumParms: 3
ParmName: Heat Name
ParmString: Distance To Mesh
ParmName: Attr Map 1
ParmString:
ParmName: Attr Map 2
ParmString:
ProcessName: Mesh/Heat Map/Measures3D/Test/Heat Sum Cell Walls
NumParms: 3
ParmName: Mode
ParmString: Average
ParmName: Heat Name
ParmString: Cell Wall Heat
ParmName: Signal
ParmString:
ProcessName: Mesh/Heat Map/Measures3D/Test/Heat distance Nucleus
NumParms: 5
ParmName: Heat Name
ParmString: Cell Wall Heat
ParmName: Signal
ParmString:
ParmName: Ignore Z
ParmString: No
ParmName: Nucleus size threshold
ParmString: -1.0
ParmName: Filter
ParmString: 0.1
ProcessName: Mesh/Heat Map/Operators/Average
NumParms: 2
ParmName: Heat Name
ParmString:
ParmName: Labeling
ParmString:
ProcessName: Mesh/Heat Map/Operators/Combine
NumParms: 11
ParmName: Heat Map 1
ParmString: A1
ParmName: Heat Map 2
ParmString: A2
ParmName: Combination
ParmString: Yes
ParmName: Combination Type
ParmString: Addition (A + B)
ParmName: Transformation
ParmString: No
ParmName: Transformation Type
ParmString: Neighborhood
ParmName: Transformation Type 2
ParmString: Average
ParmName: Ignore Parent
ParmString: Yes
ParmName: Lower Threshold
ParmString: 0
ParmName: Upper Threshold
ParmString: 100000
ParmName: New Heat Map
ParmString:
ProcessName: Mesh/Heat Map/Operators/Percentile
NumParms: 3
ParmName: Heat Name
ParmString:
ParmName: Labeling
ParmString:
ParmName: Percentile
ParmString: 50.0
ProcessName: Mesh/Heat Map/Tools/Heat Map Load
NumParms: 3
ParmName: File Name
ParmString:
ParmName: Column
ParmString: 2
ParmName: Border Size
ParmString: 1.0
ProcessName: Mesh/Heat Map/Tools/Heat Map Save
NumParms: 5
ParmName: Heat Name
ParmString:
ParmName: Labeling
ParmString:
ParmName: File Name
ParmString:
ParmName: Use Selection
ParmString: No
ParmName: Export Labelings
ParmString: No
ProcessName: Mesh/Heat Map/Tools/Heat Map Scale
NumParms: 2
ParmName: Type
ParmString: Inverse
ParmName: Heat Name
ParmString:
ProcessName: Mesh/Heat Map/Tools/Select By Heat
NumParms: 3
ParmName: Lower Threshold
ParmString: 0.0
ParmName: Upper Threshold
ParmString: 1.0
ParmName: Reset Selection
ParmString: Yes
ProcessName: Mesh/Heat Map/Tools/Set Range
NumParms: 2
ParmName: Min
ParmString:
ParmName: Max
ParmString:
ProcessName: Mesh/Lineage Tracking/Load Parents
NumParms: 4
ParmName: File Name
ParmString:
ParmName: File Type
ParmString: CSV
ParmName: Keep
ParmString: No
ParmName: Labeling
ParmString:
ProcessName: Mesh/Lineage Tracking/Reset Parents
NumParms: 1
ParmName: Labeling
ParmString: Parents
ProcessName: Mesh/Lineage Tracking/Save Parents
NumParms: 4
ParmName: File Name
ParmString:
ParmName: Existing Only
ParmString: Yes
ParmName: Labeling
ParmString: Parents
ParmName: Dimension
ParmString: Face
ProcessName: Mesh/Lineage Tracking/Select Parents
NumParms: 2
ParmName: Labeling
ParmString: Parents
ParmName: Parent Label
ParmString: 0
ProcessName: Mesh/Lineage Tracking/Set Parents
NumParms: 2
ParmName: Labeling
ParmString: Parents
ParmName: Parent Label
ParmString: 0
ProcessName: Mesh/Measuring Tools/Vertex Pair Distance
NumParms: 0
ProcessName: Mesh/Misc/Debug Draw
NumParms: 7
ParmName: Source CC
ParmString:
ParmName: Output CC
ParmString: Debug Normals
ParmName: Draw Normals
ParmString: Yes
ParmName: Normal Size
ParmString: 1.0
ParmName: Draw Nhbds
ParmString: Yes
ParmName: Nhbd Size
ParmString: 0.2
ParmName: Nhbd Offset
ParmString: 0.01
ProcessName: Mesh/Misc/Print Flip Table
NumParms: 1
ParmName: File Name
ParmString: FlipTable.txt
ProcessName: Mesh/Misc/Reduce Dimension
NumParms: 0
ProcessName: Mesh/Misc/Repair Cell Complex
NumParms: 0
ProcessName: Mesh/Misc/Update Geometry
NumParms: 0
ProcessName: Mesh/Misc/Verify Cell Complex
NumParms: 0
ProcessName: Mesh/MultiMesh/Swap or Copy Mesh 1 and 2
NumParms: 1
ParmName: Action
ParmString: 1 -> 2
ProcessName: Mesh/Segmentation/Auto Seeding
NumParms: 2
ParmName: Radius
ParmString: 3.0
ParmName: Signal
ParmString:
ProcessName: Mesh/Segmentation/Auto Segmentation
NumParms: 9
ParmName: Update
ParmString: Yes
ParmName: Normalize
ParmString: No
ParmName: Blur Cell Radius
ParmString: 2.0
ParmName: Auto-Seed Radius
ParmString: 2.0
ParmName: Blur Borders Radius
ParmString: 1.0
ParmName: Normalization Radius
ParmString: 5.0
ParmName: Border Distance
ParmString: 1.0
ParmName: Combine Threshold
ParmString: 1.1
ParmName: Signal
ParmString:
ProcessName: Mesh/Segmentation/Clear Segmentation
NumParms: 0
ProcessName: Mesh/Segmentation/Combine Labels
NumParms: 3
ParmName: Border Distance
ParmString: 1.0
ParmName: Threshold
ParmString: 1.1
ParmName: Signal
ParmString:
ProcessName: Mesh/Segmentation/Relabel Cells
NumParms: 2
ParmName: Label Start
ParmString: 1
ParmName: Label Step
ParmString: 1
ProcessName: Mesh/Segmentation/Relabel Faces
NumParms: 2
ParmName: Label Start
ParmString: 1
ParmName: Label Step
ParmString: 1
ProcessName: Mesh/Segmentation/Relabel Volumes
NumParms: 2
ParmName: Label Start
ParmString: 1
ParmName: Label Step
ParmString: 1
ProcessName: Mesh/Segmentation/Set Face Label
NumParms: 1
ParmName: Label
ParmString: 0
ProcessName: Mesh/Segmentation/Set Face Labeling
NumParms: 3
ParmName: Label
ParmString: 0
ParmName: Labeling
ParmString:
ParmName: Label Name
ParmString:
ProcessName: Mesh/Segmentation/Vertex Labels From Faces
NumParms: 0
ProcessName: Mesh/Segmentation/Watershed Segmentation
NumParms: 3
ParmName: Steps
ParmString: 50000
ParmName: Fill Corners
ParmString: Yes
ParmName: Signal
ParmString:
ProcessName: Mesh/Segmentation/Watershed Segmentation Faces
NumParms: 2
ParmName: Steps
ParmString: 50000
ParmName: Signal
ParmString:
ProcessName: Mesh/Selection/Clear Selection
NumParms: 0
ProcessName: Mesh/Selection/Copy Selection
NumParms: 0
ProcessName: Mesh/Selection/Invert Selection
NumParms: 1
ParmName: Dimension
ParmString: Faces
ProcessName: Mesh/Selection/Load Selection
NumParms: 1
ParmName: File Name
ParmString: Selection.txt
ProcessName: Mesh/Selection/Paste Selection
NumParms: 0
ProcessName: Mesh/Selection/Save Selection
NumParms: 1
ParmName: File Name
ParmString: Selection.txt
ProcessName: Mesh/Selection/Select All
NumParms: 0
ProcessName: Mesh/Selection/Select Border
NumParms: 1
ParmName: Dimension
ParmString: Vertices
ProcessName: Mesh/Selection/Select Border Vertices
NumParms: 1
ParmName: Distance
ParmString: 1.0
ProcessName: Mesh/Selection/Select Cells by Index
NumParms: 1
ParmName: Index
ParmString:
ProcessName: Mesh/Selection/Select Faces by Angle
NumParms: 2
ParmName: Direction
ParmString: 0.0 0.0 1.0
ParmName: Angle
ParmString: 15.0
ProcessName: Mesh/Selection/Select Faces of Vertices
NumParms: 0
ProcessName: Mesh/Selection/Select Faces of Volumes
NumParms: 0
ProcessName: Mesh/Selection/Select Incident Cells
NumParms: 0
ProcessName: Mesh/Selection/Select Vertices Extend
NumParms: 1
ParmName: Distance
ParmString: 1.0
ProcessName: Mesh/Selection/Select Vertices of Faces
NumParms: 0
ProcessName: Mesh/Selection/Select Vertices of Multiple Volumes
NumParms: 1
ParmName: Distance
ParmString: 1.0
ProcessName: Mesh/Selection/Select by Label
NumParms: 2
ParmName: Label
ParmString:
ParmName: Type
ParmString: Face
ProcessName: Mesh/Signal/Close Signal
NumParms: 2
ParmName: Radius
ParmString: 1.0
ParmName: Signal
ParmString:
ProcessName: Mesh/Signal/Combine Signals
NumParms: 3
ParmName: Signal 1
ParmString:
ParmName: Signal 2
ParmString:
ParmName: Operation
ParmString: Addition
ProcessName: Mesh/Signal/Difference of Gaussians
NumParms: 3
ParmName: Radius 1
ParmString: 1.0
ParmName: Radius 2
ParmString: 5.0
ParmName: Signal
ParmString:
ProcessName: Mesh/Signal/Dilate Signal
NumParms: 2
ParmName: Radius
ParmString: 1.0
ParmName: Signal
ParmString:
ProcessName: Mesh/Signal/Erase Signal
NumParms: 0
ProcessName: Mesh/Signal/Erode Signal
NumParms: 2
ParmName: Radius
ParmString: 1.0
ParmName: Signal
ParmString:
ProcessName: Mesh/Signal/Gaussian Blur
NumParms: 2
ParmName: Radius
ParmString: 2.0
ParmName: Signal
ParmString:
ProcessName: Mesh/Signal/Mesh Brighness
NumParms: 2
ParmName: Amount
ParmString: 2.0
ParmName: Signal
ParmString:
ProcessName: Mesh/Signal/Normalize Signal
NumParms: 2
ParmName: Radius
ParmString: 5.0
ParmName: Signal
ParmString:
ProcessName: Mesh/Signal/Open Signal
NumParms: 2
ParmName: Radius
ParmString: 1.0
ParmName: Signal
ParmString:
ProcessName: Mesh/Signal/Project Mesh Curvature
NumParms: 10
ParmName: Type
ParmString: Gaussian
ParmName: Neighborhood
ParmString: 5.0
ParmName: AutoScale
ParmString: Yes
ParmName: Min Curv
ParmString: -50.0
ParmName: Max Curv
ParmString: 50.0
ParmName: Percentile
ParmString: 85.0
ParmName: Output
ParmString:
ParmName: Signal
ParmString:
ParmName: Select Nhbd
ParmString: No
ParmName: Do Axis
ParmString: Yes
ProcessName: Mesh/Signal/Project Signal
NumParms: 6
ParmName: Min Dist
ParmString: 2.0
ParmName: Max Dist
ParmString: 6.0
ParmName: Use Absolute
ParmString: No
ParmName: Min Signal
ParmString: 0.0
ParmName: Max Signal
ParmString: 60000.0
ParmName: Signal
ParmString: Signal
ProcessName: Mesh/Signal/Rescale Signal
NumParms: 5
ParmName: Zero Ref
ParmString: No
ParmName: Percentile
ParmString: 95.0
ParmName: Minimum
ParmString: 0.0
ParmName: Maximum
ParmString: 1.0
ParmName: Signal
ParmString:
ProcessName: Mesh/Signal/Scale Signals
NumParms: 2
ParmName: Signal
ParmString:
ParmName: Operation
ParmString: Inverse
ProcessName: Mesh/Signal/Set Mesh Signal
NumParms: 3
ParmName: Value
ParmString: 50000
ParmName: Nan
ParmString: No
ParmName: Signal
ParmString:
ProcessName: Mesh/Signal/Signal Gradient
NumParms: 1
ParmName: Signal
ParmString:
ProcessName: Mesh/Signal/Smooth Mesh Signal
NumParms: 2
ParmName: Passes
ParmString: 3
ParmName: Signal
ParmString:
ProcessName: Mesh/Signal/Trim Signal
NumParms: 2
ParmName: Lower Threshold
ParmString: 0.0
ParmName: Upper Threshold
ParmString: 1.0
ProcessName: Mesh/Structure/Center Mesh
NumParms: 0
ProcessName: Mesh/Structure/Merge Cells
NumParms: 0
ProcessName: Mesh/Structure/Scale Mesh
NumParms: 3
ParmName: X Scale
ParmString: 1.0
ParmName: Y Scale
ParmString: 1.0
ParmName: Z Scale
ParmString: 1.0
ProcessName: Mesh/Structure/Smooth Border
NumParms: 1
ParmName: Passes
ParmString: 1
ProcessName: Mesh/Structure/Smooth Mesh
NumParms: 1
ParmName: Passes
ParmString: 1
ProcessName: Mesh/Structure/Split Edges
NumParms: 1
ParmName: Max Length
ParmString: 3
ProcessName: Mesh/Structure/Subdivide
NumParms: 0
ProcessName: Mesh/Structure/Subdivide Bisect Triangle
NumParms: 1
ParmName: Max Area
ParmString: 0.0
ProcessName: Mesh/Structure/Subdivide Bisect Wedge
NumParms: 1
ParmName: Max Area
ParmString: 0.0
ProcessName: Mesh/Structure/Subdivide Triangles
NumParms: 0
ProcessName: Mesh/Structure/Transform Mesh
NumParms: 4
ParmName: Translation
ParmString: 0.0 0.0 0.0
ParmName: Rotation Axis
ParmString: 1.0 0.0 0.0
ParmName: Angle
ParmString: 0.0
ParmName: Scale
ParmString: 0.5
ProcessName: Mesh/System/Delete Cell Complex
NumParms: 1
ParmName: Cell Complex Name
ParmString: Tissue
ProcessName: Mesh/System/Delete Selection
NumParms: 1
ParmName: Delete Dangling Cells
ParmString: Yes
ProcessName: Mesh/System/Export
NumParms: 4
ParmName: File Name
ParmString:
ParmName: File Type
ParmString: Text
ParmName: Transform
ParmString: No
ParmName: Mesh Id
ParmString:
ProcessName: Mesh/System/Import
NumParms: 5
ParmName: Mesh Id
ParmString:
ParmName: File Name
ParmString:
ParmName: Cell Complex
ParmString: Imported
ParmName: Transform
ParmString: No
ParmName: Add
ParmString: No
ProcessName: Mesh/System/Load
NumParms: 4
ParmName: File Name
ParmString: /home/marco/trabajo/MDX models/RootModel/Heart.mdxm
ParmName: Transform
ParmString: no
ParmName: Add
ParmString: no
ParmName: Mesh Id
ParmString: 0
ProcessName: Mesh/System/Rename Cell Complex
NumParms: 2
ParmName: Old Name
ParmString: Rectangle Grid
ParmName: New Name
ParmString:
ProcessName: Mesh/System/Render
NumParms: 12
ParmName: Mesh Id
ParmString:
ParmName: CC Name
ParmString:
ParmName: Default Choices
ParmString: Yes
ParmName: Selected Edges
ParmString: No
ParmName: Cell Edges
ParmString: Yes
ParmName: Face Normals
ParmString: No
ParmName: Triangle Fan
ParmString: Yes
ParmName: Blending
ParmString: 0.8
ParmName: Point Size
ParmString: 1.0