- Drop
getHpa()function and use base R or tidyverse (as illustrated in the vignette). - Repalce
getHpa(type = "details")bybrowseHPA(). - Serve data through ExperimentHub.
- Update to HPA release 21.1 <2022-05-31 Tue>
- New datasets added:
rnaConsensusTissue,rnaHpaTissue,rnaGtexTissue,rnaFantomTissue. - The dataset
rnaGeneTissuebecomesrnaGeneTissue21.0as no longer available in version 21.1
- Update to HPA release 21.0 <2021-11-22 Mon>
- Suggest rmarkdown
- New Bioc devel version
- Private
getHpaRelease()andnewHpaVersion()functions that extracts the version, date and ensembl version from the Human Protein Atlas webpage and compares the version to the data inhpar.
- Update to HPA release 20.0 <2020-11-24 Thu>
- Update to HPA release 19.3 (2020.03.06) <2020-10-26 Mon>
- New release for Bioconductor devel 3.12 <2020-10-26 Mon>
- Updated R version (>= 3.5.0) in Depends field <2020-10-26 Mon>
- Added the Secretome data <2020-10-28 Wed>
- Updated the documentation and docs folder for pkgdown <2020-10-29 Thu>
- Automated
allHparData()<2020-10-29 Thu>
- New Bioc devel version
- Update email address <2020-03-29 Sun>
- Update to HPA release 18.1 <2019-01-21 Mon>
- New release for Bioconductor devel 3.9
- New release for Bioconductor 3.8
- Update README to use BiocManager <2018-09-03 Mon>
- Use BiocManager for installation <2018-07-19 Thu>
- Rename 16.1 objects <2018-05-23 Wed>
- New Bioconductor devel
- Update to HPA version 18
- New Bioconductor release
- use html_document (rather that deprecated html_document2) <2018-01-19 Fri>
- Re-generate data sets from scripts/getHpaData.R, as discrepancies with the data downloaded form the hpa site were documented by Martin Bush <2017-07-19 Wed>
- new Bioconductor devel
- new Bioconductor release
- Update to HPA version 16.1 (2017.01.31) <2017-02-14 Tue>
- Using travis and codecov <2016-12-22 Thu>
- Migrate vignette to BiocStyle's html2 <2016-12-22 Thu>
- Bioconductor devel 3.5
- Bioconductor release 3.4
- Updating to HPA version 15, with new datasets <2016-09-14 Wed>
- Version bump to trigger package rebuilding now that purl()'ing issue has been correctly identified. knitr does not create purl()'ed (Stangle equivalent) .R files if R_CHECK_TIMINGS is set, which the build system was setting. Now it's not set, so these .R files are now created. See yihui/knitr#1212 for more. r117512 | d.tenenbaum | 2016-05-15 21:14:22 +0100 (Sun, 15 May 2016) | 6 lines
- Bump version of all packages that use knitr for vignettes. This is because of an issue (now fixed) in knitr which failed to create purl()'ed R files from vignette sources and include them in the package. This version bump will cause these packages to propagate with those R files included. r117081 | d.tenenbaum | 2016-05-03 22:30:44 +0100 (Tue, 03 May 2016) | 2 lines
- Bioc version 3.3
- Bioc version 3.1
- unit tests <2015-06-30 Tue>
- Bio version 3.2 (devel)
- Bio version 3.1 (release)
- Updated to HPA version 13 <2014-11-15 Sat>
- Use BiocStyle for vignette <2014-11-15 Sat>
- Updated to HPA version 11 <2013-04-11 Thu>
- Bioc 2.13 devel version bump
- Bioc 2.12 stable version bump
- Vignette update for knitr 1.0 compatibility, thanks Dan! <2013-01-15 Tue>
- fixing vignette <2012-10-02 Tue>
- version bump for new devel <2012-10-01 Mon>
- Added collate field <2012-09-14 Fri>
- Updated to HPA version 10 <2012-09-15 Sat>
- Updated installation part in section to use biocLite <2012-09-15 Sat>
- Added vignette <2012-09-06 Thu>
- Initial commit <2012-09-06 Thu>