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gPH

The Process Hitting is a recently introduced formalism suited for modelling qualitative dynamics of biological networks. It is a special class of Asynchronous Automata Networks.

gPH is a graphical interface for editing Process Hitting models.

Pint implements the language, simulation, formal analysis, and translation of Process Hitting models.

screenshot gPH

Dependencies

Compile-time

  • qt5
  • boost
  • graphviz

In ubuntu/debian, you can install these dependencies with

sudo apt install qt-sdk libgraphviz-dev libboost-filesystem-dev libboost-system-dev

Run-time

  • phc, from Pint is required to open files
  • other binaries from pint also have to be in the PATH in order for their functionnalities to be available in gPH