.gitignore

# Byte-compiled Python files
__pycache__/
*.py[cod]
*$py.class

# Jupyter Notebook checkpoints
.ipynb_checkpoints/

# R specific
.Rhistory
.RData
.Ruserdata
.Rproj.user/

# Shell script temporary files
*.sh~
*.bak
*.tmp

# Virtual environments
env/
venv/
ENV/
.venv/
.virtualenv/

# Python packaging files
*.egg
*.egg-info/
dist/
build/
*.whl

# Logs and database
*.log
*.sqlite
*.db

# Environment and config files
.env

# Data and results
data/raw/*
!data/raw/.gitkeep
results/figures/*
results/tables/*
results/logs/*
!results/figures/.gitkeep
!results/tables/.gitkeep
!results/logs/.gitkeep

# Docker
*.env
.dockerignore

# Pixi 
.pixi

# Miscellaneous
.DS_Store
Thumbs.db


# IPython NB Checkpoints
.ipynb_checkpoints/

# exclude compiled binaries
bin/

# exclude data from source control by default
/data/processed/
/data/raw/

# exclude external models from source control
/src/external/