Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Potential Error in DHEAS Signaling Pathway Interactions in CellChatDB #257

Open
aboutfanfan opened this issue Nov 13, 2024 · 2 comments
Open

Comments

@aboutfanfan
Copy link

Thank you for providing such a useful package. I am having trouble with the DHEAS signaling pathway when using CellChat. In CellChatDB$interaction, the ligand symbol is listed as SULT1A1, but the interaction name appears as DHEAS-SULT2B - Ppard. From my investigation, SULT1A1 and SULT2B do not belong to the same family. Could this be a bug? Any insights would be greatly appreciated! Thank you.

截屏2024-11-13 15 31 57

(CellChat version 2.1.2)

@sqjin
Copy link
Member

sqjin commented Dec 12, 2024

@aboutfanfan It seems this is a typo. It should be SULT2B1b, right?

@aboutfanfan
Copy link
Author

@aboutfanfan It seems this is a typo. It should be SULT2B1b, right?

Yes, I would appreciate it if this could be fixed in the next version of the package to avoid any confusion for future users. Thank you!

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants