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Error in read_yaml...could not find function "read_yaml" #42

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ungerdottir opened this issue Mar 7, 2022 · 0 comments

ungerdottir commented Mar 7, 2022

Hello.

I am trying to convert qza files to a phyloseq object in R for the first time.

My code is:
phy <- qza_to_phyloseq("id-filtered-table.qza", "rooted-tree.qza", "sepp-refs-gg-13-8.qza","meta.tsv")

I'm getting the error:
Error in read_yaml(paste0(tmp, "/", paste0(gsub("/..+", "", unpacked$Name[1]), :
could not find function "read_yaml"

Do you know what might be causing this error?

Thanks heaps!

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