From 475c38c01d3d6e3a194d217492735f9e52f88e43 Mon Sep 17 00:00:00 2001
From: Fabian Gruenewald <f.grunewald@rug.nl>
Date: Fri, 12 Apr 2024 12:19:30 +0200
Subject: [PATCH] add CI

---
 .github/workflows/python-app.yml | 59 ++++++++++++++++++++++++++++++++
 1 file changed, 59 insertions(+)
 create mode 100644 .github/workflows/python-app.yml

diff --git a/.github/workflows/python-app.yml b/.github/workflows/python-app.yml
new file mode 100644
index 0000000..93251fe
--- /dev/null
+++ b/.github/workflows/python-app.yml
@@ -0,0 +1,59 @@
+# This workflow will install Python dependencies, run tests and lint with a single version of Python
+# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
+
+name: test package
+
+on:
+  push:
+    branches: [ master, develop ]
+  pull_request:
+    branches: [ master, develop ]
+
+jobs:
+  build:
+
+    runs-on: ubuntu-latest
+    
+    strategy:
+      matrix:
+       py_version: ["3.7", "3.8", "3.9", "3.10", "3.11", "3.12"]
+
+    steps:
+    - uses: actions/checkout@v2
+    - name: Set up Python ${{ matrix.py_version }}
+      uses: actions/setup-python@v2
+      with:
+        python-version: ${{ matrix.py_version }}
+    - name: Install dependencies
+      run: |
+        pip install --upgrade setuptools pip
+        pip install --upgrade .
+        pip install -r requirements-tests.txt
+        
+    - name: Run pytest with codecoverage
+      run:  pytest --cov cgsmiles --cov-report=xml
+#    - name: Upload coverage codecov   
+#      uses: codecov/codecov-action@v3 
+#      with:
+#            token: ${{ secrets.CODECOV_TOKEN }}
+#            files: ./coverage.xml
+#            fail_ci_if_error: true
+#            verbose: true
+            
+  lint:
+    runs-on: ubuntu-latest
+
+    steps:
+    - uses: actions/checkout@v2
+    - name: Set up Python 3.9
+      uses: actions/setup-python@v2
+      with:
+        python-version: 3.9
+    - name: Install dependencies
+      run: |
+        pip install --upgrade setuptools pip
+        pip install --upgrade .
+        pip install -r requirements-tests.txt
+    - name: Run pylint 
+      run: |
+         pylint --disable=fixme --fail-under=8.0 cgsmiles