From 22bfb34ebf8e78ab2cf043d1157b45d85a7600be Mon Sep 17 00:00:00 2001 From: Obi Griffith Date: Mon, 19 Aug 2024 10:40:27 -0500 Subject: [PATCH] add watchmaker to strand settings table --- _posts/0009-12-01-StrandSettings.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/_posts/0009-12-01-StrandSettings.md b/_posts/0009-12-01-StrandSettings.md index 31c851b..808d217 100644 --- a/_posts/0009-12-01-StrandSettings.md +++ b/_posts/0009-12-01-StrandSettings.md @@ -35,7 +35,7 @@ There are various strand-related settings for RNA-seq tools that must be adjuste | **MGI CWL YAML (`strand` parameter)** | `first` | `second` | NONE | | **WASHU WDL YAML (`strand` parameter)** | `first` | `second` | `unstranded` | | **RegTools (`strand` parameter)** | `-s RF` | `-s FR` | `-s XS` | -| **Example kits** | **Example methods/kits:** dUTP, NSR, NNSR, Illumina TruSeq Strand Specific Total RNA, NEBNext Ultra II Directional | **Example methods/kits:** Ligation, Standard SOLiD, NuGEN Encore, 10X 5’ scRNA data | **Example kits/data:** Standard Illumina, NuGEN OvationV2, SMARTer universal low input RNA kit (TaKara), GDC normalized TCGA data | +| **Example kits** | **Example methods/kits:** dUTP, NSR, NNSR, Illumina TruSeq Strand Specific Total RNA, NEBNext Ultra II Directional, Watchmaker RNA Library Prep Kit with Polaris Depletion | **Example methods/kits:** Ligation, Standard SOLiD, NuGEN Encore, 10X 5’ scRNA data | **Example kits/data:** Standard Illumina, NuGEN OvationV2, SMARTer universal low input RNA kit (TaKara), GDC normalized TCGA data | ### Notes