fdk_format_drivers works for rsofun pmodel, but not rsofun BiomeE model.

[fabern]

In order to use FluxDataKit with the BiomeE part of the rsofun package some additional input quantities need to be defined.
These are documented in the rsofun package: https://geco-bern.github.io/rsofun/reference/biomee_p_model_drivers.html

• To make it work with pmodel, some default parameters need to be prescribed for params_siml:
  

  FluxDataKit/R/fdk_format_drivers.R

  Lines 27 to 39 in e0223b3

  	params_siml = dplyr::tibble(
  	spinup = TRUE, # to bring soil moisture to steady state
  	spinupyears = 10, # 10 is enough for soil moisture.
  	recycle = 1, # number of years recycled during spinup
  	outdt = 1, # periodicity of output. Chose integer greater than 1 to aggregate outputs.
  	ltre = FALSE,
  	ltne = FALSE,
  	ltrd = FALSE,
  	ltnd = FALSE,
  	lgr3 = TRUE,
  	lgn3 = FALSE,
  	lgr4 = FALSE
  	),

• To make it work with BiomE-model in a similar way, some additional parameters would need to be provided, too:

  • site_info containing:
    • lon, lat, evl, year_start, year_end, classid, c4, whc, koeppen_code, igbp_land_use, plant_functional_type, date_start, and date_end
  • params_siml containing:
    • spinup, spinupyears, recycle, firstyeartrend, nyeartrend, steps_per_day, do_U_shaped_mortality, update_annualLAImax, do_closedN_run, method_photosynth, method_mortality
  • params_tile containing:
    • soiltype, FLDCAP, WILTPT, K1, K2, K_nitrogen, MLmixRatio, etaN, LMAmin, fsc_fine, fsc_wood, GR_factor, l_fract, retransN, f_initialBSW, f_N_add, tf_base, par_mort, par_mort_under
  • params_species containing:
    • lifeform, phenotype, pt, alpha_FR, rho_FR, root_r, root_zeta, Kw_root, leaf_size, Vmax, Vannual, wet_leaf_dreg, m_cond, alpha_phot, gamma_L, gamma_LN, gamma_SW, gamma_FR, tc_crit, tc_crit_on, gdd_crit, betaON, betaOFF, alphaHT, thetaHT, alphaCA, thetaCA, alphaBM, thetaBM, seedlingsize, maturalage, v_seed, mortrate_d_c, mortrate_d_u, LMA, leafLS, LNbase, CNleafsupport, rho_wood, taperfactor, lAImax, tauNSC, fNSNmax, phiCSA, CNleaf0, CNsw0, CNwood0, CNroot0, CNseed0, Nfixrate0, NfixCost0, internal_gap_frac, kphio, phiRL, LAI_light
  • params_soil containing:
    • type, GMD, GSD, vwc_sat, chb, psi_sat_ref, k_sat_ref, alphaSoil, heat_capacity_dry
  • init_cohort containing:
    • init_n_cohorts, init_cohort_species, init_cohort_nindivs, init_cohort_bl, init_cohort_br, init_cohort_bsw, init_cohort_bHW, init_cohort_seedC, init_cohort_nsc
  • init_soil containing:
    • init_fast_soil_C, init_slow_soil_C, init_Nmineral, N_input