From 8dd98bdbf6e482e1e23cd60c0230d626d6bfef4e Mon Sep 17 00:00:00 2001 From: Kristina Anderson-Teixeira Date: Thu, 8 Mar 2018 06:14:50 -0500 Subject: [PATCH] fixed sign convention on several R_soil_het_C records Fixed 6 R_soil_het_C records from ORNL-FACE that had negative values (incorrect sign convention). --- data/ForC_measurements.csv | 12 ++++++------ data/ForC_variables.csv | 4 ++-- 2 files changed, 8 insertions(+), 8 deletions(-) diff --git a/data/ForC_measurements.csv b/data/ForC_measurements.csv index d4541327..c00b9ea0 100644 --- a/data/ForC_measurements.csv +++ b/data/ForC_measurements.csv @@ -10493,9 +10493,9 @@ measurement.ID,sites.sitename,plot.name,stand.age,dominant.life.form,dominant.ve 10492,ORNL-FACE,ambient ORNL-FACE,12,woody,2TDB,Liquidambar styraciflua,LIST2,BNPP_root_fine_OM,2000.666667,7,NA,9,NA,9,2.4,3,SE,1.09,NAC,NA,NAC,NA,NA,NA,NAC,NAC,NAC,NA,NA,DC/M,1,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" 10493,ORNL-FACE,ambient ORNL-FACE,12,woody,2TDB,Liquidambar styraciflua,LIST2,ANPP_0_C,2000.666667,7,NA,9,NA,9,15.94,3,SE,1.08,NAC,NA,NAC,NAC,NA,NAC,NA,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" 10494,ORNL-FACE,ambient ORNL-FACE,12,woody,2TDB,Liquidambar styraciflua,LIST2,BNPP_root_OM,2000.666667,7,NA,9,NA,9,3.65,3,SE,1.36,NAC,NA,NAC,NAC,NA,NAC,NAC,NAC,NAC,NA,NA,DC/M,1,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" -10495,ORNL-FACE,ambient ORNL-FACE,12,woody,2TDB,Liquidambar styraciflua,LIST2,R_soil_het_C,2000.666667,7,NA,9,NA,9,-7.36,1,NI,NI,NAC,NA,NAC,NA,NA,NA,NA,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" -10496,ORNL-FACE,ambient ORNL-FACE,10,woody,2TDB,Liquidambar styraciflua,LIST2,R_soil_het_C,1998.665753,7,NA,9,NA,9,-6.3,1,NI,NI,NAC,NA,NAC,NA,NA,NA,NA,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" -10497,ORNL-FACE,ambient ORNL-FACE,11,woody,2TDB,Liquidambar styraciflua,LIST2,R_soil_het_C,1999.665753,7,NA,9,NA,9,-7.2,1,NI,NI,NAC,NA,NAC,NA,NA,NA,NA,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" +10495,ORNL-FACE,ambient ORNL-FACE,12,woody,2TDB,Liquidambar styraciflua,LIST2,R_soil_het_C,2000.666667,7,NA,9,NA,9,7.36,1,NI,NI,NAC,NA,NAC,NA,NA,NA,NA,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" +10496,ORNL-FACE,ambient ORNL-FACE,10,woody,2TDB,Liquidambar styraciflua,LIST2,R_soil_het_C,1998.665753,7,NA,9,NA,9,6.3,1,NI,NI,NAC,NA,NAC,NA,NA,NA,NA,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" +10497,ORNL-FACE,ambient ORNL-FACE,11,woody,2TDB,Liquidambar styraciflua,LIST2,R_soil_het_C,1999.665753,7,NA,9,NA,9,7.2,1,NI,NI,NAC,NA,NAC,NA,NA,NA,NA,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" 10498,ORNL-FACE,ambient ORNL-FACE,10,woody,2TDB,Liquidambar styraciflua,LIST2,NPP_2_C,1998.665753,7,NA,9,NA,9,8.7,1,NI,NI,NAC,NA,NAC,NAC,NA,NAC,NAC,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" 10499,ORNL-FACE,ambient ORNL-FACE,11,woody,2TDB,Liquidambar styraciflua,LIST2,NPP_2_C,1999.665753,7,NA,9,NA,9,9.05,1,NI,NI,NAC,NA,NAC,NAC,NA,NAC,NAC,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" 10500,ORNL-FACE,ambient ORNL-FACE,12,woody,2TDB,Liquidambar styraciflua,LIST2,NPP_2_C,2000.666667,7,NA,9,NA,9,10.39,1,NI,NI,NAC,NA,NAC,NAC,NA,NAC,NAC,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" @@ -10590,9 +10590,9 @@ measurement.ID,sites.sitename,plot.name,stand.age,dominant.life.form,dominant.ve 10589,ORNL-FACE,elevated CO2 ORNL-FACE,12,woody,2TDB,Liquidambar styraciflua,LIST2,BNPP_root_fine_OM,2000.666667,7,NA,9,NA,9,3.75,2,SE,0.64,NAC,NA,NAC,NA,NA,NA,NAC,NAC,NAC,NA,NA,DC/M,1,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" 10590,ORNL-FACE,elevated CO2 ORNL-FACE,12,woody,2TDB,Liquidambar styraciflua,LIST2,ANPP_0_C,2000.666667,7,NA,9,NA,9,18.99,2,SE,0.36,NAC,NA,NAC,NAC,NA,NAC,NA,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" 10591,ORNL-FACE,elevated CO2 ORNL-FACE,12,woody,2TDB,Liquidambar styraciflua,LIST2,BNPP_root_OM,2000.666667,7,NA,9,NA,9,6.65,2,SE,1.66,NAC,NA,NAC,NAC,NA,NAC,NAC,NAC,NAC,NA,NA,DC/M,1,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" -10592,ORNL-FACE,elevated CO2 ORNL-FACE,12,woody,2TDB,Liquidambar styraciflua,LIST2,R_soil_het_C,2000.666667,7,NA,9,NA,9,-8.14,1,NI,NI,NAC,NA,NAC,NA,NA,NA,NA,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" -10593,ORNL-FACE,elevated CO2 ORNL-FACE,10,woody,2TDB,Liquidambar styraciflua,LIST2,R_soil_het_C,1998.665753,7,NA,9,NA,9,-6.89,1,NI,NI,NAC,NA,NAC,NA,NA,NA,NA,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" -10594,ORNL-FACE,elevated CO2 ORNL-FACE,11,woody,2TDB,Liquidambar styraciflua,LIST2,R_soil_het_C,1999.665753,7,NA,9,NA,9,-7.79,1,NI,NI,NAC,NA,NAC,NA,NA,NA,NA,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" +10592,ORNL-FACE,elevated CO2 ORNL-FACE,12,woody,2TDB,Liquidambar styraciflua,LIST2,R_soil_het_C,2000.666667,7,NA,9,NA,9,8.14,1,NI,NI,NAC,NA,NAC,NA,NA,NA,NA,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" +10593,ORNL-FACE,elevated CO2 ORNL-FACE,10,woody,2TDB,Liquidambar styraciflua,LIST2,R_soil_het_C,1998.665753,7,NA,9,NA,9,6.89,1,NI,NI,NAC,NA,NAC,NA,NA,NA,NA,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" +10594,ORNL-FACE,elevated CO2 ORNL-FACE,11,woody,2TDB,Liquidambar styraciflua,LIST2,R_soil_het_C,1999.665753,7,NA,9,NA,9,7.79,1,NI,NI,NAC,NA,NAC,NA,NA,NA,NA,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" 10595,ORNL-FACE,elevated CO2 ORNL-FACE,10,woody,2TDB,Liquidambar styraciflua,LIST2,NPP_2_C,1998.665753,7,NA,9,NA,9,11.1,1,NI,NI,NAC,NA,NAC,NAC,NA,NAC,NAC,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" 10596,ORNL-FACE,elevated CO2 ORNL-FACE,11,woody,2TDB,Liquidambar styraciflua,LIST2,NPP_2_C,1999.665753,7,NA,9,NA,9,10.58,1,NI,NI,NAC,NA,NAC,NAC,NA,NAC,NAC,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" 10597,ORNL-FACE,elevated CO2 ORNL-FACE,12,woody,2TDB,Liquidambar styraciflua,LIST2,NPP_2_C,2000.666667,7,NA,9,NA,9,12.24,1,NI,NI,NAC,NA,NAC,NAC,NA,NAC,NAC,NA,NA,NA,NA,0,0,Norby_2002_nppo,NA,originally entered in Bety-DB; data download 4/10/2014,NA,extratropical,Mohammad Moein Zavarehee Azimi,1,"Dr. Kristina J. Anderson-Teixeira, Smithsonian Institution, teixeirak@si.edu" diff --git a/data/ForC_variables.csv b/data/ForC_variables.csv index f88591c6..60cf94b6 100644 --- a/data/ForC_variables.csv +++ b/data/ForC_variables.csv @@ -60,7 +60,7 @@ variable.ID,variable.type,variable.name,units,description,equations,requires.all 59,flux,R_auto_wood_C,Mg C ha-1 yr-1,Annual aboveground respiration of woody stems ,NA,0,0,0,NA,NA,31,0.03,10.38,NA 60,flux,R_auto_foliage_C,Mg C ha-1 yr-1,Annual foliar respiration,NA,0,0,0,NA,NA,32,0.6,11.35,NA 61,flux,R_auto_root_C,Mg C ha-1 yr-1,Annual root respiration (all size classes). Note methodology: root gas exchange/ root exclusion/ isotopes,R_soil_C = R_soil_het_C + R_auto_root_C,0,0,0,NA,NA,49,0.58,24.6,"If estimated through direct measurement of root gas exchange, covariates should include depth; min.diameter_root; max.diameter_root" -62,flux,R_soil_het_C,Mg C ha-1 yr-1,Annual soil heterotrophic respiration,R_soil_C = R_soil_het_C + R_auto_root_C,0,0,0,NA,NA,289,-8.14,15.07,NA +62,flux,R_soil_het_C,Mg C ha-1 yr-1,Annual soil heterotrophic respiration,R_soil_C = R_soil_het_C + R_auto_root_C,0,0,0,NA,NA,289,0.56,15.07,NA 63,flux,R_soil_C,Mg C ha-1 yr-1,Annual soil respiration,R_soil_C = R_soil_het_C + R_auto_root_C,0,0,0,NA,NA,399,0.85,24.14,NA 64,stock,total.ecosystem_C,Mg C ha-1,"Includes total biomass, deadwood, organic layer, and soil organic C",total.ecosystem_C = biomass_C + deadwood_C + organic.layer_C + soil_C,1,1,1,NA,NA,63,20.6,488,NA 65,stock,total.ecosystem_2_C,Mg C ha-1,"Total ecosystem carbon in organic matter, including total biomass, deadwood, and organic layer but excluding soil organic carbon.",total.ecosystem_2_C = biomass_C + deadwood_C + organic.layer_C ,1,1,1,NA,NA,8,52.9,399,NA @@ -115,4 +115,4 @@ variable.ID,variable.type,variable.name,units,description,equations,requires.all 114,covariates,min.length,cm,Minimum length,NA,NA,NA,NA,NA,NA,43,0,100,NA 115,covariates,u.star,m s-1,Friction velocity,NA,NA,NA,NA,NA,NA,290,0,0.5,NA 116,covariates,stem.level,NA,"Indicates whether the variable is computed at the individual tree (0; e.g., only counts mortality if all stems of a multi-stemmed individual die) or stem (1; e.g., counts stem mortality when the individual tree remains alive) level.",NA,NA,NA,NA,NA,NA,0,-,-,NA -117,covariates,include.recruitment,NA,Indicates whether recruitment is counted as part of ANPP_woody_stem (0-no; 1-yes),NA,NA,NA,NA,NA,NA,13,0,1,"Including recruitment in NPP estimates overestimates contributions of small stems, which have been growing for years before entering a tree census." +117,covariates,include.recruitment,NA,Indicates whether recruitment is counted as part of ANPP_woody_stem (0-no; 1-yes),NA,NA,NA,NA,NA,NA,13,0,1,"Including recruitment in NPP estimates overestimates contributions of small stems, which have been growing for years before entering a tree census." \ No newline at end of file