pyproject.toml

[tool.poetry]
name = "configure-dms-viz"
version = "1.6.0"
description = "Configure your data for visualization with dms-viz.github.io"
authors = ["Will Hannon <hannonww@gmail.com>"]
maintainers = ["Will Hannon <hannonww@gmail.com>"]
license = "MIT"
readme = "README.md"
homepage = "https://github.com/dms-viz"
repository = "https://github.com/dms-viz/configure_dms_viz"
documentation = "https://dms-viz.github.io/dms-viz-docs/"
keywords = [
    "deep mutational scanning",
    "interactive protein structure",
    "dms-viz",
    "dms",
    "protein",
]
packages = [{ include = "configure_dms_viz" }]

[tool.poetry.dependencies]
python = "^3.9"
click = "^8.1.6"
pandas = ">=2.0.0"
biopython = ">=1.0"
requests = ">2.0.0"

[tool.poetry.group.dev.dependencies]
black = "^23.7.0"
ruff = "^0.0.282"
pytest = "^7.4.2"

[build-system]
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"

[tool.poetry.scripts]
configure-dms-viz = "configure_dms_viz.configure_dms_viz:cli"

[tool.ruff]
# Enable flake8-bugbear (`B`) rules.
select = ["E", "F", "B"]

# Never enforce `E501` (line length violations).
ignore = ["E501"]

# Avoid trying to fix flake8-bugbear (`B`) violations.
unfixable = ["B"]

# Ignore these files and directories.
extend-exclude = ["build", "dist", ".*"]

# Ignore `E402` (import violations) in all `__init__.py` files, and in `path/to/file.py`.
[tool.ruff.per-file-ignores]
"__init__.py" = ["E402"]
"path/to/file.py" = ["E402"]