From 945c0c74f9956f77340bf4c349c636d6828dbfaa Mon Sep 17 00:00:00 2001 From: komalsrathi Date: Mon, 7 Oct 2024 09:03:43 -0400 Subject: [PATCH] add repos param --- analyses/data_preparation/00-setup.R | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/analyses/data_preparation/00-setup.R b/analyses/data_preparation/00-setup.R index d94656f..294a81e 100644 --- a/analyses/data_preparation/00-setup.R +++ b/analyses/data_preparation/00-setup.R @@ -2,20 +2,20 @@ # CRAN packages if (!require("optparse", quietly = TRUE)) - install.packages("optparse") + install.packages("optparse", repos = "http://cran.us.r-project.org") if (!require("tidyverse", quietly = TRUE)) - install.packages("tidyverse") + install.packages("tidyverse", repos = "http://cran.us.r-project.org") if (!require("datawizard", quietly = TRUE)) - install.packages("datawizard") + install.packages("datawizard", repos = "http://cran.us.r-project.org") if (!require("reshape2", quietly = TRUE)) - install.packages("reshape2") + install.packages("reshape2", repos = "http://cran.us.r-project.org") # Bioc packages if (!require("BiocManager", quietly = TRUE)) - install.packages("BiocManager") + install.packages("BiocManager", repos = "http://cran.us.r-project.org") if (!require("rtracklayer", quietly = TRUE)) BiocManager::install("rtracklayer")