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Hello all:
Today I tried to inspect the sorted clusters I got from Kilosort2 with phy but for some reasons the wavefrom view is only showing me the calculated mean waveform instead of overlap of say 100 wavefroms no matter how I tweak the settings so I found one issue thread mentioned running :"pip install --upgrade git+https://github.com/cortex-lab/phylib.git" (#906, I know... it's not the same issue I probably shouldn't have run the command) and decided to give that a try... it made things worse, now I get prompt with an error: " DLL load failed while importing _sqlite3: The specified procedure could not be found."
I went through the lengthy process of updating conda, updating anaconda, uninstall and reinstall Phy2, setting up the environment with environment.yml, just throw the sqlite3.dll file into /DLL folders as someone on stackoverflow suggested, and nothing changed...
and here how it look like when I tried opening up the test file:
I also tried running phy --version when is activated, getting the same error message.
I wonder if anyone have run into similar issue, any help is much appreciated!!
The text was updated successfully, but these errors were encountered:
good news: I installed phy2 in new environment created w/o all the dependency in conda create -n phy2 -y python=3.11 cython dask h5py joblib matplotlib numpy pillow pip pyopengl pyqt pyqtwebengine pytest python qtconsole requests responses scikit-learn scipy traitlets and it worked
bad news: after hours we are back to ground zeros :/ found similar issue here: https://github.com/cortex-lab/phy/issues/1238#issue-20099004848
Hello all:
Today I tried to inspect the sorted clusters I got from Kilosort2 with phy but for some reasons the wavefrom view is only showing me the calculated mean waveform instead of overlap of say 100 wavefroms no matter how I tweak the settings so I found one issue thread mentioned running :"pip install --upgrade git+https://github.com/cortex-lab/phylib.git" (#906, I know... it's not the same issue I probably shouldn't have run the command) and decided to give that a try... it made things worse, now I get prompt with an error: " DLL load failed while importing _sqlite3: The specified procedure could not be found."
I went through the lengthy process of updating conda, updating anaconda, uninstall and reinstall Phy2, setting up the environment with environment.yml, just throw the sqlite3.dll file into /DLL folders as someone on stackoverflow suggested, and nothing changed...
and here how it look like when I tried opening up the test file:
I also tried running phy --version when is activated, getting the same error message.
I wonder if anyone have run into similar issue, any help is much appreciated!!
The text was updated successfully, but these errors were encountered: