From e3ff9edd392cddb32f57bb68384bb77f8cd7852e Mon Sep 17 00:00:00 2001 From: Zach McKenzie <92116279+zm711@users.noreply.github.com> Date: Thu, 15 Jun 2023 08:29:38 -0400 Subject: [PATCH 1/3] add all conda dependencies, fix sklearn, and install from git --- environment.yml | 16 ++++++++++++++-- 1 file changed, 14 insertions(+), 2 deletions(-) diff --git a/environment.yml b/environment.yml index 67c530930..2f57c4986 100644 --- a/environment.yml +++ b/environment.yml @@ -1,4 +1,7 @@ name: phy2 +channels: + - conda-forge + - defaults dependencies: - python=3.7 - pip @@ -7,9 +10,18 @@ dependencies: - scipy - h5py - pyqt + - pyopengl + - pyqtwebengine + - pytest + - qtconsole + - requests + - responses + - traitlets - dask - cython - pillow - - sklearn + - scikit-learn + - joblib - pip: - - phy + - git+https://github.com/cortex-lab/phy.git + From dff5c942188f01e3e61621bff2a6a28a8473deef Mon Sep 17 00:00:00 2001 From: Zach McKenzie <92116279+zm711@users.noreply.github.com> Date: Thu, 15 Jun 2023 08:41:02 -0400 Subject: [PATCH 2/3] deleted python requirement --- environment.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/environment.yml b/environment.yml index 2f57c4986..2e2b15d7b 100644 --- a/environment.yml +++ b/environment.yml @@ -3,7 +3,7 @@ channels: - conda-forge - defaults dependencies: - - python=3.7 + - python - pip - numpy - matplotlib From 77e99e0ee0266ba0f38e2265e197bf5cb9932c7c Mon Sep 17 00:00:00 2001 From: Zach McKenzie <92116279+zm711@users.noreply.github.com> Date: Thu, 15 Jun 2023 11:58:25 -0400 Subject: [PATCH 3/3] need to add git to make git work --- environment.yml | 1 + 1 file changed, 1 insertion(+) diff --git a/environment.yml b/environment.yml index 2e2b15d7b..55eac984c 100644 --- a/environment.yml +++ b/environment.yml @@ -5,6 +5,7 @@ channels: dependencies: - python - pip + - git - numpy - matplotlib - scipy