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Contributing

We have a lot of work to do and many ways in which you can contribute to this project.

Before you jump in you can familiarize yourself with:

At this stage most of the work requires to interact with the checklists in their spreadsheet versions:

  • their content is described here.
  • you can find them in this google drive folder.
  • the MRI spreadsheet is accessible here
  • the MEEG spreadsheet is accessible here

Below is list of the different tasks that you can contribute to. These are mostly related to the short term goals of the project. If however you feel more interested to start hacking at some of the issues related to long term goals, feel free to do so.

General 'to do list' common for the f/MRI and MEEG app

  • Identify high-priority items that will be in the next release of the app.
  • For each item:
  • Give it a unique item name (a formula in the MRI spreadsheet should automatically take care of that)
  • Create a specific unambiguous question
  • Add details and explanation to that item, possibly with examples and/or links to other resources to best guide users
  • Identify the response type expected
  • Create a response choice list where needed
  • Assess whether there is way to not expose users to that item (or some of the response choice for that item) if it is not relevant to them - by answering another question that would select which following items to show (e.g. 'which preprocessing steps were used?') - if some response choice are not available for that item based on some previous answer
  • Create a boilerplate method section corresponding to a single item or a set of items.

'To do list' for the f/MRI

  • For the acquisition section create a new schema activity to group all the items that will be found for any MRI sequences

You can check the current kanban board

Who's who on the COBIDAS Checklist Team

The following have contributed to the development of this tool (in alphabetical order by last name). If you contributed to the COBIDAS Checklist and your name is not listed, please add it (via pull request or get in touch if you don't know how to do this).

  • Sanu Ann Abraham

  • Federico Adolfi

  • Johannes Algermissen

I am a PhD student at the Donders Institute at Radboud University, Nijmegen, the Netherlands. I work on human reinforcement learning and decision making using fMRI and EEG. With respect to open science, I am particularly interested in pre-registration and standardizing methods reports.

  • James Bartlett

  • Rémi Gau

I am a post doc at the Université Catholique de Louvain la Neuve in Belgium. I investigate on multisensory integration and mostly rely on high-resolution fMRI for my work. I also have a small thing for open-transparent-reproducible science.

  • Satrajit Ghosh

  • Cassandra Gould van Praag

I am a postdoc at the University of Oxford Department of Psychiatry in the Psychopharmacology and Emotion Research Laboratory. I support (f)MRI research across the Oxford Health Biomedical Research Centre Experimental Medicine theme, where I help researchers design, execute and analyse awesome experimental medicine investigations. I am passionate about bringing inexperienced researchers into the world of programming and Open Research through excellent documentation and accessible resources.

  • Ruud Hortensius

  • Anisha Keshavan

  • Mary Miedema

  • David Moreau

  • Tim Van Mourik

  • Ilona Ruotsalainen

I am PhD student at the University of Jyväskylä, Finland.

  • Cristina Scarpazza

  • Jeremy Simon

  • Eduard Klapwijk

  • Tom Nichols

  • Zsuzsika Sjoerds

  • Angie Tepper

  • Martina G. Vilas

  • Kristina Wiebels

  • Dorien Huijser

Core team

TBD

Contributions

Legend

source: https://github.com/kentcdodds/all-contributors

Emoji Represents
💬 Answering Questions (on gitter, GitHub, or in person)
🐛 Bug reports
📝 Blogposts
💻 Code
📖 Documentation and specification
🎨 Design
💡 Examples
📋 Event Organizers
💵 Financial Support
🔍 Funding/Grant Finders
🤔 Ideas & Planning
🚇 Infrastructure (Hosting, Build-Tools, etc)
🔌 Plugin/utility libraries
👀 Reviewed Pull Requests
🔧 Tools
🌍 Translation
⚠️ Tests
✅ Tutorials
📢 Talks
📹 Videos

Below is a more precise breakdown of who contributed to what

Design, idea, planning

  • Cassandra Gould van Praag
  • Rémi Gau
  • Ilona Ruotsalainen
  • Angie Tepper
  • Mary Miedema
  • Martina G. Vilas
  • Federico Adolfi
  • Cristina Scarpazza
  • Tom Nichols

MRI spreadsheet

  • Cassandra Gould van Praag
  • Rémi Gau
  • Ilona Ruotsalainen
  • Angie Tepper

M/EEG spreadsheet

  • Mary Miedema
  • Martina G. Vilas
  • Federico Adolfi

ReproNim schema

  • Sanu Ann Abraham
  • Anisha Keshavan
  • Rémi Gau
  • Satrajit Ghosh

User interface

  • Federico Adolfi
  • Rémi Gau
  • Tim Van Mourik
  • Sanu Ann Abraham
  • Anisha Keshavan

Meta-analysis use case

  • Cristina Scarpazza
  • David Moreau

fMRI pre-registration use case

  • Zsuzsika Sjoerds
  • Kristina Wiebels
  • Rémi Gau

EEG / MEG pre-registration use case

  • James Bartlett
  • Ruud Hortensius
  • Eduard Klapwijk
  • Jeremy Simon

BIDS compatibility

  • Zsuzsika Sjoerds
  • Kristina Wiebels
  • Rémi Gau