diff --git a/CHANGES.md b/CHANGES.md index ae48675..d5ea2b3 100644 --- a/CHANGES.md +++ b/CHANGES.md @@ -1,3 +1,6 @@ +### 2.0.1 +* Test data in `examples/sample_configs.local.json` moved to a non-expiring location. + ### 2.0.0 * PCAP-core forked to cancerit and all legacy PCAWG code removed. * Update to cgpBigWig/libBigWig to handle bug detected in ASCAT. diff --git a/Dockerfile b/Dockerfile index cf2cac2..2abebe0 100644 --- a/Dockerfile +++ b/Dockerfile @@ -3,7 +3,7 @@ FROM ubuntu:14.04 MAINTAINER keiranmraine@gmail.com LABEL uk.ac.sanger.cgp="Cancer Genome Project, Wellcome Trust Sanger Institute" \ - version="2.0.0" \ + version="2.0.1" \ description="The CGP mapping pipeline for dockstore.org" USER root diff --git a/Dockstore.cwl b/Dockstore.cwl index 6cf93a3..04bb881 100644 --- a/Dockstore.cwl +++ b/Dockstore.cwl @@ -19,7 +19,7 @@ dct:creator: requirements: - class: DockerRequirement - dockerPull: "quay.io/wtsicgp/dockstore-cgpmap:2.0.0" + dockerPull: "quay.io/wtsicgp/dockstore-cgpmap:2.0.1" hints: - class: ResourceRequirement diff --git a/examples/sample_configs.local.json b/examples/sample_configs.local.json index a16287a..5ffd305 100644 --- a/examples/sample_configs.local.json +++ b/examples/sample_configs.local.json @@ -9,7 +9,7 @@ }, "bams_in": [ {"class": "File", - "path": "ftp://ngs.sanger.ac.uk/scratch/project/cancer/cgpmap/testdata/insilico_21.bam"} + "path": "ftp://ngs.sanger.ac.uk/production/cancer/dockstore/cgpmap/insilico_21.bam"} ], "cram": false, "sample": "test",