From a437defac863653499721f0e83a32fe3ab8809aa Mon Sep 17 00:00:00 2001 From: Shaun Jackman Date: Thu, 30 Sep 2021 16:57:29 -0700 Subject: [PATCH] maker: Bump revision for bioperl macOS also depends on Bit::Vector DBD::SQLite Inline::C. --- Formula/maker.rb | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/Formula/maker.rb b/Formula/maker.rb index c77d47c0a..bab0254e5 100644 --- a/Formula/maker.rb +++ b/Formula/maker.rb @@ -6,6 +6,7 @@ class Maker < Formula homepage "https://www.yandell-lab.org/software/maker.html" url "http://yandell.topaz.genetics.utah.edu/maker_downloads/static/maker-2.31.11.tgz" sha256 "129ce1d33df8ae29d417f0dac0df756398c5b76bdd58213233e94e735fe38c37" + revision 1 bottle do root_url "https://ghcr.io/v2/brewsci/bio" @@ -25,8 +26,8 @@ class Maker < Formula depends_on "brewsci/bio/exonerate" depends_on "brewsci/bio/repeatmasker" depends_on "brewsci/bio/snap" + depends_on "perl" - uses_from_macos "perl" uses_from_macos "sqlite" # Build MAKER with MPI support, but do not force the dependency on the user. @@ -44,8 +45,7 @@ def install ENV.prepend "PERL5LIB", Formula["bioperl"].libexec/"lib/perl5" ENV.prepend_create_path "PERL5LIB", prefix/"perl5/lib/perl5" system "cpanm", "-l", prefix/"perl5", - "IO::All", "Perl::Unsafe::Signals", "Want", "forks", "forks::shared" - system "cpanm", "-l", prefix/"perl5", "Bit::Vector", "DBD::SQLite", "Inline::C" unless OS.mac? + "Bit::Vector", "DBD::SQLite", "forks", "forks::shared", "Inline::C", "IO::All", "Perl::Unsafe::Signals", "Want" cd "src" do mpi = build.with?("open-mpi") ? "yes" : "no"