wildcard error in line 242 SnakeMake File

[saras224]

Hi @elimoss @bsiranosian

I have used this command:

snakemake --use-singularity --singularity-args '--bind /home/rsharma/ ' -s /home/rsharma/lathe/Snakefile --configfile /home/rsharma/lathe/config.yaml --restart-times 0 --keep-going --latency-wait 30 --cores 10

After this it says building DAG of jobs and gives this error:

Building DAG of jobs...
WildcardError in line 242 of /home/rsharma/lathe/Snakefile:
Wildcards in input files cannot be determined from output files:
'contig_cutoff'

My config.txt
config.txt
file

file_names.txt:
file_names.txt

I have posted my issue and waiting since last two weeks. Please tell me how do I resolve the error so that I can use your tool for proceeding with the analysis.

Thanks in Advance
Saraswati Awasthi

[dgmaghini]

Duplicate of #20 .