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magpie-check-inputs
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#!/bin/bash
#############################################################################
# Copyright (C) 2013-2015 Lawrence Livermore National Security, LLC.
# Produced at Lawrence Livermore National Laboratory (cf, DISCLAIMER).
# Written by Albert Chu <[email protected]>
# LLNL-CODE-644248
#
# This file is part of Magpie, scripts for running Hadoop on
# traditional HPC systems. For details, see https://github.com/llnl/magpie.
#
# Magpie is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# Magpie is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
# General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with Magpie. If not, see <http://www.gnu.org/licenses/>.
#############################################################################
# This script is checks environment variable setup. For the most part,
# it shouldn't be editted. See job submission files for configuration
# details.
__Magpie_check_is_enabled () {
local projectnametocheck=$1
shift
local projectnameneededfor=$2
shift
local extramsg=$@
local uppercaseprojectnametocheck=`echo ${projectnametocheck} | tr '[:lower:]' '[:upper:]'`
local varnametocheck="${uppercaseprojectnametocheck}_SETUP"
if [ "${!varnametocheck}" != "yes" ]
then
echo "${projectnameneededfor} requires ${projectnametocheck} to be setup, set ${varnametocheck} to yes"
if [ "${extramsg}X" != "X" ]
then
echo "${extramsg}"
fi
exit 1
fi
}
__Magpie_check_dependencies_not_setuponly () {
local projectnametocheck=$1
local projectnameneededfor=$2
local uppercaseprojectnametocheck=`echo ${projectnametocheck} | tr '[:lower:]' '[:upper:]'`
local modevarnametocheck="${uppercaseprojectnametocheck}_MODE"
local lowercaseprojectnameneededfor=`echo ${projectnameneededfor} | tr '[:upper:]' '[:lower:]'`
local uppercaseprojectnameneededfor=`echo ${projectnameneededfor} | tr '[:lower:]' '[:upper:]'`
local modevarnameneededfor="${uppercaseprojectnameneededfor}_MODE"
if [ "${MAGPIE_JOB_TYPE}" == "${lowercaseprojectnameneededfor}" ] && [ "${!modevarnameneededfor}" != "setuponly" ]
then
if [ "${!modevarnametocheck}" == "setuponly" ]
then
echo "Cannot run/setup ${projectnameneededfor} if ${projectnametocheck} mode is setuponly"
exit 1
fi
fi
}
__Magpie_check_if_set_is_yes_or_no () {
local varname="$1"
if [ "${!varname}X" != "X" ] \
&& ( [ "${!varname}" != "yes" ] && [ "${!varname}" != "no" ] )
then
echo "${varname} must be set to yes or no"
exit 1
fi
}
__Magpie_check_if_set_is_true_or_false () {
local varname="$1"
if [ "${!varname}X" != "X" ] \
&& ( [ "${!varname}" != "true" ] && [ "${!varname}" != "false" ] )
then
echo "${varname} must be set to true or false"
exit 1
fi
}
__Magpie_check_environment_variable_must_be_set () {
local varname="$1"
if [ "${!varname}X" == "X" ]
then
echo "${varname} environment variable must be set"
exit 1
fi
}
__Magpie_check_must_be_set () {
local varname="$1"
local extramsg="$2"
if [ "${!varname}X" == "X" ]
then
echo "${varname} must be set ${extramsg}"
exit 1
fi
}
__Magpie_check_if_set_is_a_directory () {
local varname="$1"
if [ "${!varname}X" != "X" ] && [ ! -d ${!varname} ]
then
echo "${varname} does not point to a directory"
exit 1
fi
}
__Magpie_check_if_set_is_regular_file () {
local varname="$1"
if [ "${!varname}X" != "X" ] && [ ! -f ${!varname} ]
then
echo "${varname} does not point to a regular file"
exit 1
fi
}
__Magpie_check_is_executable () {
local varname="$1"
if [ ! -x ${!varname} ]
then
echo "${varname}=\"${!varname}\" does not have execute permissions"
exit 1
fi
}
__Magpie_check_must_be_set_and_is_directory () {
local varname="$1"
local extramsg="$2"
__Magpie_check_must_be_set "${varname}" "${extramsg}"
__Magpie_check_if_set_is_a_directory "${varname}"
}
__Magpie_check_must_be_set_and_is_regular_file () {
local varname="$1"
local extramsg="$2"
__Magpie_check_must_be_set "${varname}" "${extramsg}"
__Magpie_check_if_set_is_regular_file "${varname}"
}
__Magpie_check_must_be_set_and_is_executable () {
local varname="$1"
local extramsg="$2"
__Magpie_check_must_be_set "${varname}" "${extramsg}"
__Magpie_check_is_executable "${varname}"
}
#
# Check Core Inputs
#
__Magpie_check_must_be_set "MAGPIE_SUBMISSION_TYPE"
# slurmsbatch, msubslurm, msubtorque legacy
if [ "${MAGPIE_SUBMISSION_TYPE}" != "slurmsbatch" ] \
&& [ "${MAGPIE_SUBMISSION_TYPE}" != "sbatchsrun" ] \
&& [ "${MAGPIE_SUBMISSION_TYPE}" != "msubslurm" ]\
&& [ "${MAGPIE_SUBMISSION_TYPE}" != "msubslurmsrun" ]\
&& [ "${MAGPIE_SUBMISSION_TYPE}" != "msubtorque" ]\
&& [ "${MAGPIE_SUBMISSION_TYPE}" != "msubtorquepdsh" ]\
&& [ "${MAGPIE_SUBMISSION_TYPE}" != "lsfmpirun" ]
then
echo "MAGPIE_SUBMISSION_TYPE environment variable must be set to sbatchsrun, msubslurmsrun, msubtorquepdsh, lsfmpirun"
exit 1
fi
# slurmsbatch & msubslurm legacy
if [ "${MAGPIE_SUBMISSION_TYPE}" == "slurmsbatch" ] \
|| [ "${MAGPIE_SUBMISSION_TYPE}" == "sbatchsrun" ] \
|| [ "${MAGPIE_SUBMISSION_TYPE}" == "msubslurm" ] \
|| [ "${MAGPIE_SUBMISSION_TYPE}" == "msubslurmsrun" ]
then
__Magpie_check_environment_variable_must_be_set "SLURM_NODEID"
__Magpie_check_environment_variable_must_be_set "SLURM_NNODES"
__Magpie_check_environment_variable_must_be_set "SLURM_JOB_NODELIST"
__Magpie_check_environment_variable_must_be_set "SLURM_JOB_NAME"
__Magpie_check_environment_variable_must_be_set "SLURM_JOB_ID"
fi
#
# Check Magpie Inputs
#
__Magpie_check_must_be_set_and_is_directory "MAGPIE_SCRIPTS_HOME"
source ${MAGPIE_SCRIPTS_HOME}/magpie/exports/magpie-exports-submission-type
source ${MAGPIE_SCRIPTS_HOME}/magpie/lib/magpie-lib-hadoop-helper
source ${MAGPIE_SCRIPTS_HOME}/magpie/lib/magpie-lib-calculate-values
source ${MAGPIE_SCRIPTS_HOME}/magpie/lib/magpie-lib-helper
if [ "${MAGPIE_TIMELIMIT_MINUTES}X" == "X" ]
then
echo "MAGPIE_TIMELIMIT_MINUTES environment variable could not be calculated"
exit 1
fi
__Magpie_check_must_be_set "MAGPIE_LOCAL_DIR"
__Magpie_check_if_set_is_yes_or_no "MAGPIE_NO_LOCAL_DIR"
__Magpie_check_must_be_set "MAGPIE_JOB_TYPE"
if [ "${MAGPIE_JOB_TYPE}" != "hadoop" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "hbase" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "phoenix" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "pig" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "mahout" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "spark" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "kafka" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "zeppelin" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "storm" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "tachyon" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "zookeeper" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "testall" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "script" ] \
&& [ "${MAGPIE_JOB_TYPE}" != "interactive" ]
then
echo "MAGPIE_JOB_TYPE must be set to hadoop, hbase, pig, mahout, phoenix, spark, kafka, zeppelin, storm, tachyon, zookeeper, testall, script, or interactive"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "script" ]
then
__Magpie_check_must_be_set_and_is_executable "MAGPIE_SCRIPT_PATH" "for MAGPIE_JOB_TYPE = ${MAGPIE_JOB_TYPE}"
fi
magpiestartupshutdowntime=`expr ${magpie_startup_time_value} + ${magpie_shutdown_time_value}`
if [ ${MAGPIE_TIMELIMIT_MINUTES} -le ${magpiestartupshutdowntime} ]
then
echo "timelimit must be atleast the sum of MAGPIE_STARTUP_TIME & MAGPIE_SHUTDOWN_TIME"
exit 1
fi
if [ "${MAGPIE_PRE_JOB_RUN}X" != "X" ]
then
__Magpie_check_is_executable "MAGPIE_PRE_JOB_RUN"
if [ ${magpie_startup_time_value} -lt 5 ]
then
echo "MAGPIE_STARTUP_TIME must be >= 5 minutes if MAGPIE_PRE_JOB_RUN is set"
exit 1
fi
fi
if [ "${MAGPIE_POST_JOB_RUN}X" != "X" ]
then
__Magpie_check_is_executable "MAGPIE_POST_JOB_RUN"
if [ ${magpie_shutdown_time_value} -lt 10 ]
then
echo "MAGPIE_SHUTDOWN_TIME must be >= 10 minutes if MAGPIE_POST_JOB_RUN is set"
exit 1
fi
fi
#
# Check General Inputs
#
__Magpie_check_if_set_is_a_directory "JAVA_HOME"
if [ "${MAGPIE_PYTHON}X" != "X" ]
then
if [ ! -x ${MAGPIE_PYTHON} ]
then
echo "MAGPIE_PYTHON does not point to an executable"
exit 1
fi
fi
nodecount=${MAGPIE_NODE_COUNT}
# nodecountmaster is a counter to count the master only once
nodecountmaster=1
magpieprojects="HADOOP HADOOP_UDA_SETUP PIG MAHOUT HBASE PHOENIX SPARK KAFKA ZEPPELIN STORM TACHYON ZOOKEEPER"
for project in ${magpieprojects}
do
setupvar="${project}_SETUP"
__Magpie_check_if_set_is_yes_or_no ${setupvar}
done
# Did user turn on SOMETHING to run
#
# Pig is not "something", b/c it runs on top of hadoop
# Mahout is not "something", b/c it runs on top of hadoop
if [ "${HADOOP_SETUP}" != "yes" ] \
&& [ "${HBASE_SETUP}" != "yes" ] \
&& [ "${SPARK_SETUP}" != "yes" ] \
&& [ "${KAFKA_SETUP}" != "yes" ] \
&& [ "${ZEPPELIN_SETUP}" != "yes" ] \
&& [ "${STORM_SETUP}" != "yes" ] \
&& [ "${TACHYON_SETUP}" != "yes" ] \
&& [ "${ZOOKEEPER_SETUP}" != "yes" ]
then
echo "Neither HADOOP_SETUP nor HBASE_SETUP nor SPARK_SETUP nor KAFKA_SETUP nor ZEPPELIN_SETUP nor STORM_SETUP nor TACHYON_SETUP nor ZOOKEEPER_SETUP are set to yes, there is nothing to setup"
exit 1
fi
# Did user turn on something matching job run type
magpieprojects="HADOOP PIG MAHOUT HBASE PHOENIX SPARK KAFKA ZEPPELIN STORM TACHYON ZOOKEEPER"
for project in ${magpieprojects}
do
projectlowercase=`echo ${project} | tr '[:upper:]' '[:lower:]'`
setupvar="${project}_SETUP"
if [ "${MAGPIE_JOB_TYPE}" == "${projectlowercase}" ] \
&& [ "${!setupvar}" != "yes" ]
then
echo "Cannot run ${projectlowercase} job type if ${setupvar} is not enabled"
exit 1
fi
done
if [ "${MAGPIE_JOB_TYPE}" == "testall" ] \
&& [ "${HADOOP_SETUP}" != "yes" ] \
&& [ "${PIG_SETUP}" != "yes" ] \
&& [ "${MAHOUT_SETUP}" != "yes" ] \
&& [ "${HBASE_SETUP}" != "yes" ] \
&& [ "${SPARK_SETUP}" != "yes" ] \
&& [ "${KAFKA_SETUP}" != "yes" ] \
&& [ "${ZEPPELIN_SETUP}" != "yes" ] \
&& [ "${STORM_SETUP}" != "yes" ] \
&& [ "${TACHYON_SETUP}" != "yes" ] \
&& [ "${ZOOKEEPER_SETUP}" != "yes" ]
then
echo "Cannot run testall job type, nothing is enabled to be setup"
exit 1
fi
#
# Check Hadoop Inputs
#
if [ "${HADOOP_SETUP}" == "yes" ]
then
# Subtract 1 for Hadoop Master
nodecount=`expr ${nodecount} - ${nodecountmaster}`
nodecountmaster=0
__Magpie_check_must_be_set "JAVA_HOME" "for Hadoop"
__Magpie_check_must_be_set "HADOOP_VERSION" "to run Hadoop"
__Magpie_check_must_be_set_and_is_directory "HADOOP_HOME" "to run Hadoop"
__Magpie_check_must_be_set "HADOOP_LOCAL_DIR" "to run Hadoop"
if [ "${HADOOP_SETUP_TYPE}" != "MR1" ] \
&& [ "${HADOOP_SETUP_TYPE}" != "MR2" ] \
&& [ "${HADOOP_SETUP_TYPE}" != "HDFS1" ] \
&& [ "${HADOOP_SETUP_TYPE}" != "HDFS2" ]
then
echo "HADOOP_SETUP_TYPE must be set to MR1 or MR2 or HDFS1 or HDFS2"
exit 1
fi
if [ "${HADOOP_MODE}" != "terasort" ] \
&& [ "${HADOOP_MODE}" != "script" ] \
&& [ "${HADOOP_MODE}" != "interactive" ] \
&& [ "${HADOOP_MODE}" != "upgradehdfs" ] \
&& [ "${HADOOP_MODE}" != "decommissionhdfsnodes" ] \
&& [ "${HADOOP_MODE}" != "launch" ] \
&& [ "${HADOOP_MODE}" != "setuponly" ] \
&& [ "${HADOOP_MODE}" != "hdfsonly" ]
then
echo "HADOOP_MODE must be set to terasort, script, interactive, upgradehdfs, decommissionhdfsnodes, launch, setuponly, or hdfsonly"
exit 1
fi
if ([ "${HADOOP_SETUP_TYPE}" == "HDFS1" ] || [ "${HADOOP_SETUP_TYPE}" == "HDFS2" ]) \
&& [ "${MAGPIE_JOB_TYPE}" == "hadoop" ] \
&& [ "${HADOOP_MODE}" == "terasort" ]
then
echo "HADOOP_SETUP_TYPE must be set to MR1 or MR2 for HADOOP_MODE = ${HADOOP_MODE}"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "hadoop" ] && [ "${HADOOP_MODE}" == "script" ]
then
__Magpie_check_must_be_set_and_is_executable "HADOOP_SCRIPT_PATH" "for HADOOP_MODE = ${HADOOP_MODE}"
fi
if [ "${MAGPIE_JOB_TYPE}" == "hadoop" ] && [ "${HADOOP_MODE}" == "upgradehdfs" ]
then
if [ "${HADOOP_SETUP_TYPE}" != "MR2" ] && [ "${HADOOP_SETUP_TYPE}" != "HDFS2" ]
then
echo "HADOOP_SETUP_TYPE must be set to MR2 or HDFS2 for HADOOP_MODE of ${HADOOP_MODE}"
exit 1
fi
# Returns 0 for ==, 1 for $1 > $2, 2 for $1 < $2
Magpie_vercomp ${HADOOP_VERSION} "2.2.0"
if [ $? == "2" ]
then
echo "HADOOP_MODE of ${HADOOP_MODE} only supported in Hadoop 2.2.0 and more recent versions"
exit 1
fi
fi
if [ "${MAGPIE_JOB_TYPE}" == "hadoop" ] && [ "${HADOOP_MODE}" == "decommissionhdfsnodes" ]
then
if [ "${HADOOP_SETUP_TYPE}" != "MR2" ] && [ "${HADOOP_SETUP_TYPE}" != "HDFS2" ]
then
echo "HADOOP_SETUP_TYPE must be set to MR2 or HDFS2 for HADOOP_MODE of ${HADOOP_MODE}"
exit 1
fi
# Returns 0 for ==, 1 for $1 > $2, 2 for $1 < $2
Magpie_vercomp ${HADOOP_VERSION} "2.3.0"
if [ $? == "2" ]
then
echo "HADOOP_MODE of ${HADOOP_MODE} only supported in Hadoop 2.3.0 and more recent versions"
exit 1
fi
__Magpie_check_must_be_set "HADOOP_DECOMMISSION_HDFS_NODE_SIZE" "for HADOOP_MODE = ${HADOOP_MODE}"
if [ ! "${HADOOP_DECOMMISSION_HDFS_NODE_SIZE}" -gt "0" ]
then
echo "HADOOP_DECOMMISSION_HDFS_NODE_SIZE must be > 0"
exit 1
fi
# Few things can't be running at the same time
if [ "${HBASE_SETUP}" == "yes" ]; then
echo "HBASE_SETUP must be set to no for HADOOP_MODE = ${HADOOP_MODE}"
exit 1
fi
if [ "${PHOENIX_SETUP}" == "yes" ]; then
echo "PHOENIX_SETUP must be set to no for HADOOP_MODE = ${HADOOP_MODE}"
exit 1
fi
if [ "${SPARK_SETUP}" == "yes" ]; then
echo "SPARK_SETUP must be set to no for HADOOP_MODE = ${HADOOP_MODE}"
exit 1
fi
# Few additional checks can only be done later, such as HADOOP_SLAVE_COUNT > replication
# and HADOOP_DECOMMISSION_HDFS_NODE_SIZE < current HADOOP_SLAVE_COUNT
fi
if [ "${HADOOP_FILESYSTEM_MODE}" != "hdfs" ] \
&& [ "${HADOOP_FILESYSTEM_MODE}" != "hdfsoverlustre" ] \
&& [ "${HADOOP_FILESYSTEM_MODE}" != "hdfsovernetworkfs" ] \
&& [ "${HADOOP_FILESYSTEM_MODE}" != "rawnetworkfs" ] \
&& [ "${HADOOP_FILESYSTEM_MODE}" != "intellustre" ] \
&& [ "${HADOOP_FILESYSTEM_MODE}" != "magpienetworkfs" ]
then
echo "HADOOP_FILESYSTEM_MODE must be set to hdfs, hdfsoverlustre, hdfsovernetworkfs, rawnetworkfs, intellustre, or magpienetworkfs"
exit 1
fi
if ([ "${HADOOP_SETUP_TYPE}" == "HDFS1" ] \
|| [ "${HADOOP_SETUP_TYPE}" == "HDFS2" ]) \
&& ! Magpie_hadoop_filesystem_mode_is_hdfs_type
then
echo "HADOOP_FILESYSTEM_MODE must be set to hdfs, hdfsoverlustre, or hdfsovernetworkfs with HADOOP_SETUP_TYPE=${HADOOP_SETUP_TYPE}"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "hadoop" ] \
&& [ "${HADOOP_MODE}" == "decommissionhdfsnodes" ] \
&& ! Magpie_hadoop_filesystem_mode_is_hdfs_on_network_type
then
echo "HADOOP_FILESYSTEM_MODE must be set to hdfsoverlustre or hdfsovernetworkfs with HADOOP_MODE=${HADOOP_MODE}"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "hadoop" ] \
&& [ "${HADOOP_MODE}" == "upgradehdfs" ] \
&& ! Magpie_hadoop_filesystem_mode_is_hdfs_type
then
echo "HADOOP_FILESYSTEM_MODE must be set to hdfs, hdfsoverlustre, or hdfsovernetworkfs with HADOOP_MODE=${HADOOP_MODE}"
exit 1
fi
if ([ "${HADOOP_FILESYSTEM_MODE}" == "intellustre" ] \
|| [ "${HADOOP_FILESYSTEM_MODE}" == "magpienetworkfs" ]) \
&& [ "${HADOOP_SETUP_TYPE}" != "MR2" ]
then
echo "HADOOP_FILESYSTEM_MODE=${HADOOP_FILESYSTEM_MODE} only works with HADOOP_SETUP_TYPE = MR2"
exit 1
fi
if [ "${HADOOP_FILESYSTEM_MODE}" == "hdfs" ]
then
__Magpie_check_must_be_set "HADOOP_HDFS_PATH" "for HADOOP_FILESYSTEM_MODE = ${HADOOP_FILESYSTEM_MODE}"
__Magpie_check_if_set_is_yes_or_no "HADOOP_HDFS_PATH_CLEAR"
fi
if [ "${HADOOP_FILESYSTEM_MODE}" == "hdfsoverlustre" ]
then
__Magpie_check_must_be_set "HADOOP_HDFSOVERLUSTRE_PATH" "for HADOOP_FILESYSTEM_MODE = ${HADOOP_FILESYSTEM_MODE}"
__Magpie_check_if_set_is_yes_or_no "HADOOP_HDFSOVERLUSTRE_REMOVE_LOCKS"
fi
if [ "${HADOOP_FILESYSTEM_MODE}" == "hdfsovernetworkfs" ]
then
__Magpie_check_must_be_set "HADOOP_HDFSOVERNETWORKFS_PATH" "for HADOOP_FILESYSTEM_MODE = ${HADOOP_FILESYSTEM_MODE}"
__Magpie_check_if_set_is_yes_or_no "HADOOP_HDFSOVERNETWORKFS_REMOVE_LOCKS"
fi
if [ "${HADOOP_FILESYSTEM_MODE}" == "rawnetworkfs" ]
then
__Magpie_check_must_be_set "HADOOP_RAWNETWORKFS_PATH" "for HADOOP_FILESYSTEM_MODE = ${HADOOP_FILESYSTEM_MODE}"
fi
if [ "${HADOOP_LOCALSTORE}X" != "X" ]
then
__Magpie_check_if_set_is_yes_or_no "HADOOP_LOCALSTORE_CLEAR"
fi
if [ "${HADOOP_FILESYSTEM_MODE}" == "intellustre" ]
then
__Magpie_check_must_be_set "HADOOP_INTELLUSTRE_PATH" "for HADOOP_FILESYSTEM_MODE = ${HADOOP_FILESYSTEM_MODE}"
__Magpie_check_if_set_is_yes_or_no "HADOOP_INTELLUSTRE_SHUFFLE"
fi
if [ "${HADOOP_FILESYSTEM_MODE}" == "magpienetworkfs" ] \
&& [ "${HADOOP_MAGPIENETWORKFS_PATH}X" == "X" ]
then
__Magpie_check_must_be_set "HADOOP_MAGPIENETWORKFS_PATH" "for HADOOP_FILESYSTEM_MODE = ${HADOOP_FILESYSTEM_MODE}"
firstchar=`echo ${HADOOP_MAGPIENETWORKFS_PATH} | head -c 1`
if [ "${firstchar}" != "/" ]
then
echo "HADOOP_MAGPIENETWORKFS_PATH must be an absolute path"
exit 1
fi
fi
if Magpie_hdfs_federation_enabled
then
if ! Magpie_hadoop_filesystem_mode_is_hdfs_type
then
echo "HDFS federation can only work with an HDFS based file system, cannot work with HADOOP_FILESYSTEM_MODE = ${HADOOP_FILESYSTEM_MODE}"
exit 1
fi
# Returns 0 for ==, 1 for $1 > $2, 2 for $1 < $2
Magpie_vercomp ${HADOOP_VERSION} "2.2.0"
if [ $? == "2" ]
then
echo "HDFS Fderation only supported in Hadoop 2.2.0 and more recent versions"
exit 1
fi
# Ensure user listed atleast 1 mount for each namenode
for i in `seq 1 ${HDFS_FEDERATION_NAMENODE_COUNT}`
do
mountname="HDFS_FEDERATION_NAMENODE_${i}_MOUNT_1"
eval mountvalue="\$$mountname"
if [ "${mountvalue}X" == "X" ]
then
echo "HDFS federation requires atleast one mount specified for each namenode, ${mountname} must be specified"
exit 1
fi
done
# Check that all mounts are absolute paths
for i in `seq 1 ${HDFS_FEDERATION_NAMENODE_COUNT}`
do
j=1
while true;
do
mountname="HDFS_FEDERATION_NAMENODE_${i}_MOUNT_${j}"
eval mountvalue="\$$mountname"
if [ "${mountvalue}X" == "X" ]
then
break;
fi
if [[ "${mountvalue}" != /* ]]
then
echo "HDFS federation mount must be an absolute path beginning with a /"
exit 1
fi
j=`expr ${j} + 1`
done
done
nodecount=`expr ${nodecount} - ${HDFS_FEDERATION_NAMENODE_COUNT-1}`
fi
if [ "${HADOOP_MODE}" == "terasort" ]
then
__Magpie_check_if_set_is_yes_or_no "HADOOP_TERASORT_CLEAR_CACHE"
__Magpie_check_if_set_is_yes_or_no "HADOOP_TERASORT_RUN_TERACHECKSUM"
__Magpie_check_if_set_is_yes_or_no "HADOOP_TERASORT_RUN_TERAVALIDATE"
fi
__Magpie_check_if_set_is_yes_or_no "HADOOP_COMPRESSION"
if Magpie_hadoop_filesystem_mode_is_hdfs_type
then
__Magpie_check_if_set_is_yes_or_no "HADOOP_PER_JOB_HDFS_PATH"
fi
if [ ${nodecount} -le "0" ]
then
echo "No remaining nodes for Hadoop slave nodes, increase node count or adjust node allocations"
exit 1
fi
fi
#
# Check UDA Inputs
#
if [ "${HADOOP_UDA_SETUP}" == "yes" ]
then
__Magpie_check_is_enabled "Hadoop" "UDA"
if [ "${HADOOP_SETUP_TYPE}" != "MR1" ]
then
echo "UDA is only supported with HADOOP_SETUP_TYPE = MR2"
exit 1
fi
# Returns 0 for ==, 1 for $1 > $2, 2 for $1 < $2
Magpie_vercomp ${HADOOP_VERSION} "2.2.0"
if [ $? == "2" ]
then
echo "HADOOP UDA only supported in Hadoop 2.2.0 and more recent versions"
exit 1
fi
__Magpie_check_must_be_set_and_is_regular_file "HADOOP_UDA_JAR" "to run Hadoop w/ UDA"
__Magpie_check_if_set_is_a_directory "HADOOP_UDA_LIBPATH"
if [ "${HADOOP_FILESYSTEM_MODE}" == "intellustre" ] \
&& [ "${HADOOP_INTELLUSTRE_SHUFFLE}X" != "X" ] \
&& [ "${HADOOP_INTELLUSTRE_SHUFFLE}" == "yes" ]
then
echo "UDA shuffling cannot be enabled alongside Lustre Shuffling, please disable one of them"
exit 1
fi
fi
#
# Check Pig Inputs
#
if [ "${PIG_SETUP}" == "yes" ]
then
__Magpie_check_must_be_set "JAVA_HOME" "for Pig"
__Magpie_check_must_be_set "PIG_VERSION" "to run Pig"
__Magpie_check_must_be_set_and_is_directory "PIG_HOME" "to run Pig"
__Magpie_check_must_be_set "PIG_LOCAL_DIR" "to run Pig"
__Magpie_check_is_enabled "Hadoop" "Pig"
if [ "${PIG_MODE}" != "testpig" ] \
&& [ "${PIG_MODE}" != "script" ] \
&& [ "${PIG_MODE}" != "interactive" ]
then
echo "PIG_MODE must be set to testpig, script, interactive"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "pig" ] && [ "${PIG_MODE}" == "script" ]
then
__Magpie_check_must_be_set_and_is_regular_file "PIG_SCRIPT_PATH" "for PIG_MODE = ${PIG_MODE}"
fi
if ([ "${HADOOP_SETUP_TYPE}" == "HDFS1" ] || [ "${HADOOP_SETUP_TYPE}" == "HDFS2" ]) \
&& [ "${MAGPIE_JOB_TYPE}" == "pig" ] \
&& ([ "${PIG_MODE}" == "testpig" ] \
|| [ "${PIG_MODE}" == "script" ])
then
echo "HADOOP_SETUP_TYPE must be set to MR1 or MR2 for PIG_MODE=${PIG_MODE}"
exit 1
fi
__Magpie_check_dependencies_not_setuponly "Hadoop" "Pig"
fi
#
# Check Mahout Inputs
#
if [ "${MAHOUT_SETUP}" == "yes" ]
then
__Magpie_check_must_be_set "JAVA_HOME" "for Mahout"
__Magpie_check_must_be_set "MAHOUT_VERSION" "to run Mahout"
__Magpie_check_must_be_set_and_is_directory "MAHOUT_HOME" "to run Mahout"
__Magpie_check_must_be_set "MAHOUT_LOCAL_DIR" "to run Mahout"
__Magpie_check_is_enabled "Hadoop" "Mahout"
if [ "${MAHOUT_MODE}" != "clustersyntheticcontrol" ] \
&& [ "${MAHOUT_MODE}" != "script" ] \
&& [ "${MAHOUT_MODE}" != "interactive" ]
then
echo "MAHOUT_MODE must be set to clustersyntheticcontrol, script, interactive"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "mahout" ] && [ "${MAHOUT_MODE}" == "script" ]
then
__Magpie_check_must_be_set_and_is_regular_file "MAHOUT_SCRIPT_PATH" "for MAHOUT_MODE = ${MAHOUT_MODE}"
fi
if ([ "${HADOOP_SETUP_TYPE}" == "HDFS1" ] || [ "${HADOOP_SETUP_TYPE}" == "HDFS2" ]) \
&& [ "${MAGPIE_JOB_TYPE}" == "mahout" ] \
&& ([ "${MAHOUT_MODE}" == "clustersyntheticcontrol" ] \
|| [ "${MAHOUT_MODE}" == "script" ])
then
echo "HADOOP_SETUP_TYPE must be set to MR1 or MR2 for MAHOUT_MODE=${MAHOUT_MODE}"
exit 1
fi
__Magpie_check_dependencies_not_setuponly "Hadoop" "Mahout"
fi
#
# Check Hbase Inputs
#
if [ "${HBASE_SETUP}" == "yes" ]
then
# Subtract 1 for Hbase Master
nodecount=`expr ${nodecount} - ${nodecountmaster}`
nodecountmaster=0
__Magpie_check_must_be_set "JAVA_HOME" "for Hbase"
__Magpie_check_must_be_set "HBASE_VERSION" "to run Hbase"
__Magpie_check_must_be_set_and_is_directory "HBASE_HOME" "to run Hbase"
__Magpie_check_must_be_set "HBASE_LOCAL_DIR" "to run Hbase"
__Magpie_check_if_set_is_yes_or_no "HBASE_START_THRIFT_SERVER"
__Magpie_check_is_enabled "Hadoop" "Hbase"
__Magpie_check_is_enabled "Zookeeper" "Hbase"
if ! Magpie_hadoop_filesystem_mode_is_hdfs_type
then
echo "Magpie supports Hbase over HDFS, HADOOP_FILESYSTEM_MODE must be set to hdfs, hdfsoverlustre, or hdfsovernetworkfs"
exit 1
fi
if [ "${magpie_shutdown_time_value}" -lt 20 ]
then
echo "Magpie Shutdown Time must be atleast 20 minutes with Hbase"
exit 1
fi
if [ "${HBASE_MODE}" != "performanceeval" ] \
&& [ "${HBASE_MODE}" != "script" ] \
&& [ "${HBASE_MODE}" != "interactive" ] \
&& [ "${HBASE_MODE}" != "setuponly" ]
then
echo "HBASE_MODE must be set to performanceeval, script, interactive, setuponly"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "hbase" ] && [ "${HBASE_MODE}" == "performanceeval" ]
then
if [ "${HBASE_PERFORMANCEEVAL_MODE}X" != "X" ]
then
if [ "${HBASE_PERFORMANCEEVAL_MODE}" != "sequential-thread" ] \
&& [ "${HBASE_PERFORMANCEEVAL_MODE}" != "sequential-mr" ] \
&& [ "${HBASE_PERFORMANCEEVAL_MODE}" != "random-thread" ] \
&& [ "${HBASE_PERFORMANCEEVAL_MODE}" != "random-mr" ]
then
echo "HBASE_PERFORMANCEEVAL_MODE must be sequential-thread, sequential-mr, random-thread, or random-mr"
exit 1
fi
if ([ "${HADOOP_SETUP_TYPE}" == "HDFS1" ] || [ "${HADOOP_SETUP_TYPE}" == "HDFS2" ]) \
&& ([ "${HBASE_PERFORMANCEEVAL_MODE}" == "sequential-mr" ] || [ "${HBASE_PERFORMANCEEVAL_MODE}" == "random-mr" ])
then
echo "HADOOP_SETUP_TYPE must be set to MR1 or MR2 for HBASE_PERFORMANCEEVAL_MODE=${HBASE_PERFORMANCEEVAL_MODE}"
exit 1
fi
fi
if [ "${HBASE_PERFORMANCEEVAL_ROW_COUNT}X" != "X" ]
then
if [ "${HBASE_PERFORMANCEEVAL_ROW_COUNT}" -lt 1 ]
then
echo "HBASE_PERFORMANCEEVAL_ROW_COUNT must be >= 1"
exit 1
fi
fi
if [ "${HBASE_PERFORMANCEEVAL_CLIENT_COUNT}X" != "X" ]
then
if [ "${HBASE_PERFORMANCEEVAL_CLIENT_COUNT}" -lt 1 ] || [ "${HBASE_PERFORMANCEEVAL_CLIENT_COUNT}" -gt 500 ]
then
echo "HBASE_PERFORMANCEEVAL_CLIENT_COUNT must be >= 1 and <= 500"
exit 1
fi
fi
fi
if [ "${MAGPIE_JOB_TYPE}" == "hbase" ] && [ "${HBASE_MODE}" == "script" ]
then
__Magpie_check_must_be_set_and_is_executable "HBASE_SCRIPT_PATH" "for HBASE_MODE = ${HBASE_MODE}"
fi
__Magpie_check_if_set_is_yes_or_no "HBASE_MAJOR_COMPACTION_ON_SHUTDOWN"
__Magpie_check_dependencies_not_setuponly "Hadoop" "Hbase"
__Magpie_check_dependencies_not_setuponly "Zookeeper" "Hbase"
if [ ${nodecount} -le "0" ]
then
echo "No remaining nodes for Hbase regionservers, increase node count or adjust node allocations"
exit 1
fi
fi
#
# Check Phoenix Inputs
#
if [ "${PHOENIX_SETUP}" == "yes" ]
then
__Magpie_check_must_be_set "JAVA_HOME" "for Phoenix"
__Magpie_check_must_be_set "PHOENIX_VERSION" "to run Phoenix"
__Magpie_check_must_be_set_and_is_directory "PHOENIX_HOME" "to run Phoenix"
__Magpie_check_must_be_set "PHOENIX_LOCAL_DIR" "to run Phoenix"
__Magpie_check_is_enabled "Hbase" "Phoenix"
if [ "${PHOENIX_MODE}" != "performanceeval" ] \
&& [ "${PHOENIX_MODE}" != "script" ] \
&& [ "${PHOENIX_MODE}" != "interactive" ] \
&& [ "${PHOENIX_MODE}" != "server" ] \
&& [ "${PHOENIX_MODE}" != "setuponly" ]
then
echo "PHOENIX_MODE must be set to performanceeval, script, interactive, server, or setuponly"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "phoenix" ] && [ "${PHOENIX_MODE}" == "performanceeval" ]
then
if [ "${PHOENIX_PERFORMANCEEVAL_ROW_COUNT}X" != "X" ]
then
if [ "${PHOENIX_PERFORMANCEEVAL_ROW_COUNT}" -lt 1 ]
then
echo "PHOENIX_PERFORMANCEEVAL_ROW_COUNT must be >= 1"
exit 1
fi
fi
fi
if [ "${MAGPIE_JOB_TYPE}" == "phoenix" ] && [ "${PHOENIX_MODE}" == "script" ]
then
__Magpie_check_must_be_set_and_is_regular_file "PHOENIX_SCRIPT_PATH" "for PHOENIX_MODE = ${PHOENIX_MODE}"
fi
__Magpie_check_dependencies_not_setuponly "Hbase" "Phoenix"
fi
#
# Check Spark Inputs
#
if [ "${SPARK_SETUP}" == "yes" ]
then
# Subtract 1 for Spark Master
nodecount=`expr ${nodecount} - ${nodecountmaster}`
nodecountmaster=0
__Magpie_check_must_be_set "JAVA_HOME" "for Spark"
# Do not require, will break legacy scripts
# __Magpie_check_must_be_set "MAGPIE_PYTHON" "for Spark"
__Magpie_check_must_be_set "SPARK_VERSION" "to run Spark"
__Magpie_check_must_be_set_and_is_directory "SPARK_HOME" "to run Spark"
__Magpie_check_must_be_set "SPARK_LOCAL_DIR" "to run Spark"
if [ "${HADOOP_SETUP}" != "yes" ]
then
__Magpie_check_must_be_set "SPARK_LOCAL_SCRATCH_DIR" "if Hadoop is not setup"
fi
if [ "${SPARK_LOCAL_SCRATCH_DIR}X" != "X" ]
then
__Magpie_check_if_set_is_yes_or_no "SPARK_LOCAL_SCRATCH_DIR_CLEAR"
fi
if [ "${SPARK_MODE}" != "sparkpi" ] \
&& [ "${SPARK_MODE}" != "sparkwordcount" ] \
&& [ "${SPARK_MODE}" != "script" ] \
&& [ "${SPARK_MODE}" != "interactive" ] \
&& [ "${SPARK_MODE}" != "setuponly" ]
then
echo "SPARK_MODE must be set to sparkpi, sparkwordcount, script, interactive, setuponly"
exit 1
fi
if [ "${MAGPIE_JOB_TYPE}" == "spark" ] && [ "${SPARK_MODE}" == "sparkwordcount" ]
then
__Magpie_check_must_be_set "SPARK_SPARKWORDCOUNT_FILE" "for SPARK_MODE = ${SPARK_MODE}"
if ! echo ${SPARK_SPARKWORDCOUNT_FILE} | grep -q -E "^[a-zA-Z0-9_]+:\/\/"
then
echo "File SPARK_SPARKWORDCOUNT_FILE does not specify scheme via scheme:// expression"
exit 1
fi
if [ "${SPARK_SPARKWORDCOUNT_COPY_IN_FILE}X" != "X" ]
then
if ! echo ${SPARK_SPARKWORDCOUNT_COPY_IN_FILE} | grep -q -E "^[a-zA-Z0-9_]+:\/\/"
then
echo "File SPARK_SPARKWORDCOUNT_COPY_IN_FILE does not specify scheme via scheme:// expression"
exit 1
fi
# At the moment only hdfs:// and file:// are handled
if ! echo ${SPARK_SPARKWORDCOUNT_COPY_IN_FILE} | grep -q -E "^hdfs:\/\/" \
&& ! echo ${SPARK_SPARKWORDCOUNT_COPY_IN_FILE} | grep -q -E "^file:\/\/"
then
echo "File SPARK_SPARKWORDCOUNT_COPY_IN_FILE can only handle hdfs:// and file://"
exit 1
fi
if echo ${SPARK_SPARKWORDCOUNT_FILE} | grep -q -E "^hdfs:\/\/"
then
__Magpie_check_is_enabled "Hadoop" "Spark" "Or set SPARK_SPARKWORDCOUNT_FILE to not use hdfs"
if ! Magpie_hadoop_filesystem_mode_is_hdfs_type
then
echo "Cannot copy in file to SPARK_SPARKWORDCOUNT_FILE=${SPARK_SPARKWORDCOUNT_FILE}, HADOOP_FILESYSTEM_MODE must be set to an HDFS filesystem"
exit 1
fi
fi
if echo ${SPARK_SPARKWORDCOUNT_COPY_IN_FILE} | grep -q -E "^hdfs:\/\/"
then
__Magpie_check_is_enabled "Hadoop" "Spark" "Or set SPARK_SPARKWORDCOUNT_COPY_IN_FILE to not use hdfs"
if ! Magpie_hadoop_filesystem_mode_is_hdfs_type
then
echo "Cannot copy file from SPARK_SPARKWORDCOUNT_COPY_IN_FILE=${SPARK_SPARKWORDCOUNT_FILE}, HADOOP_FILESYSTEM_MODE must be set to an HDFS filesystem"
exit 1
fi
fi
fi
fi
__Magpie_check_if_set_is_true_or_false "SPARK_DEPLOY_SPREADOUT"
if [ "${MAGPIE_JOB_TYPE}" == "spark" ] && [ "${SPARK_MODE}" == "script" ]
then
__Magpie_check_must_be_set_and_is_executable "SPARK_SCRIPT_PATH" "for SPARK_MODE = ${SPARK_MODE}"
fi
__Magpie_check_if_set_is_yes_or_no "SPARK_USE_YARN"