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publication_resources.csv
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doi,resource_type,resource_link
10.1101/2024.11.14.618081,Code,https://github.com/rendeirolab/agingpath
10.1101/2024.11.14.618081,Preprint,https://doi.org/10.1101/2024.11.14.618081
10.1101/2024.11.14.618081,Data,https://zenodo.org/doi/10.5281/zenodo.13330658
10.1038/s41556-024-01407-w,Code,https://github.com/reinisj/intron_tagging
10.1038/s41467-024-46320-w,Data,https://zenodo.org/doi/10.5281/zenodo.5719187
10.1038/s41467-024-46320-w,Code,https://github.com/ElementoLab/utuc-imc
10.1038/s41467-024-46320-w,Preprint,https://doi.org/10.1101/2021.11.16.468622
10.1101/2024.02.14.580236,Code,https://marsilea.readthedocs.io/
10.1101/2024.02.14.580236,Code,https://github.com/Marsilea-viz/marsilea
10.1016/j.isci.2024.109301,Preprint,https://doi.org/10.1101/2023.07.22.550133
10.1016/j.devcel.2023.11.008,Preprint,https://doi.org/10.1101/2021.11.01.466807
10.1101/2023.09.05.556371,
10.1016/j.cell.2023.07.019,Preprint,https://doi.org/10.1101/2022.02.09.479588
10.1093/neuonc/noad117,,
10.1016/j.cels.2023.05.009,,
10.1164/rccm.202207-1384OC,Preprint,https://doi.org/10.1101/2022.03.16.484543
10.1186/s13059-022-02824-6,,
10.1101/2022.11.28.22282811,Code,https://github.com/ElementoLab/post-covid-imc
10.1101/2022.11.28.22282811,Data,https://doi.org/10.5281/zenodo.7060271
10.1101/2022.11.28.22282811,Preprint,https://doi.org/10.1101/2022.11.28.22282811
10.1038/s41592-022-01657-2,Press,https://news.cornell.edu/stories/2022/11/new-computational-method-builds-detailed-maps-human-tissues
10.1038/s41592-022-01657-2,Data,https://zenodo.org/record/6376767
10.1038/s41592-022-01657-2,Code,https://github.com/ElementoLab/utag
10.1038/s41592-022-01657-2,Preprint,https://doi.org/10.1101/2022.03.15.484534
10.1126/sciimmunol.add4906,Code,https://github.com/ElementoLab/covid-pdcs
10.1016/j.isci.2022.104223,Data,https://doi.org/10.5281/zenodo.5182825
10.1016/j.isci.2022.104223,Code,https://github.com/ElementoLab/covid-placenta
10.1101/mcs.a006151,Code,https://github.com/ElementoLab/msuc-imc
10.1016/j.xcrm.2022.100522,PDF,https://www.sciencedirect.com/science/article/pii/S2666379122000222/pdfft?md5=d0d26d9a767cddacc0e92b849f193155&pid=1-s2.0-S2666379122000222-main.pdf
10.3389/fimmu.2021.809937,Preprint,https://dx.doi.org/10.1101/2021.09.05.21263141
10.3389/fimmu.2021.809937,Code,https://github.com/ElementoLab/covid-metabolomics
10.3389/fimmu.2021.809937,Data,https://github.com/ElementoLab/covid-metabolomics/tree/main/data
10.1101/2021.11.16.468622,Preprint,https://dx.doi.org/10.1101/2021.11.16.468622
10.1093/gigascience/giab077,Preprint,https://dx.doi.org/10.1101/2020.10.08.331322
10.1093/gigascience/giab077,Code,https://dx.doi.org/10.5524/100936
10.1093/gigascience/giab077,Code,https://pep.databio.org/en/latest/
10.1161/CIRCULATIONAHA.120.046464,,
10.1038/s41592-021-01153-z,Preprint,https://dx.doi.org/10.1101/2019.12.17.879304
10.1038/s41592-021-01153-z,Preprint,https://dx.doi.org/10.1101/2019.12.17.879304
10.1038/s41592-021-01153-z,Code,https://github.com/epigen/scifiRNA-seq_publication
10.1038/s41592-021-01153-z,Notebook,/2019/12/13/chromium_modeling
10.1038/s41467-021-23445-w,PDF,https://www.nature.com/articles/s41467-021-23445-w.pdf
10.1038/s41467-021-23445-w,Data,https://doi.org/10.5281/zenodo.4719434
10.1038/s41586-021-03569-1,PDF,https://www.nature.com/articles/s41586-021-03569-1.pdf
10.1038/s41586-021-03475-6,PDF,https://www.nature.com/articles/s41586-021-03475-6.pdf
10.1038/s41586-021-03475-6,Preprint,https://doi.org/10.1101/2020.10.26.20219584
10.1038/s41586-021-03475-6,Data,https://doi.org/10.5281/zenodo.4719434
10.1038/s41586-021-03475-6,Data,https://doi.org/10.5281/zenodo.4139443
10.1038/s41586-021-03475-6,Data,https://doi.org/10.5281/zenodo.4637034
10.1038/s41586-021-03475-6,Data,https://doi.org/10.5281/zenodo.4633905
10.1038/s41586-021-03475-6,Data,https://doi.org/10.5281/zenodo.4635285
10.1038/s41586-021-03475-6,Code,https://github.com/ElementoLab/covid-imc
10.1038/s41586-021-03475-6,Code,https://github.com/ElementoLab/covid-imc-viz
10.1038/s41588-021-00777-3,Code,https://github.com/Kubicek-Lab-at-CeMM/BAF-kinetics
10.26508/lsa.202000955,PDF,https://www.life-science-alliance.org/content/lsa/4/2/e202000955.full.pdf
10.26508/lsa.202000955,Preprint,https://dx.doi.org/10.1101/2020.09.08.20189092
10.26508/lsa.202000955,Code,https://github.com/ElementoLab/covid-flowcyto
10.1038/s41388-020-01584-6,Preprint,https://dx.doi.org/10.1101/422832
10.1038/s41586-020-2424-4,Data,https://structural-immunity-paper.medical-epigenomics.org/
10.1038/s41586-020-2424-4,Data,https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE134663
10.1038/s41586-020-2424-4,Code,https://github.com/epigen/StructuralImmunity
10.3390/cells9061484,,
10.1016/j.cmet.2020.03.003,Data,https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-7345/
10.1016/j.cmet.2020.03.003,Data,https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-7525/
10.1038/s41467-019-14081-6,Preprint,https://dx.doi.org/10.1038/s41467-019-14081-6
10.1038/s41467-019-14081-6,Data,https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE111015
10.1038/s41467-019-14081-6,Code,https://github.com/epigen/cll-ibrutinib_time
10.1016/j.immuni.2019.12.002,PDF,https://dx.doi.org/10.1016/j.immuni.2019.12.002
10.1016/j.immuni.2019.12.002,Data,https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE130884
10.1016/j.celrep.2019.10.018,Data,https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-7525/
10.1016/j.celrep.2019.10.018,Data,https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-7375/
10.1016/j.celrep.2019.10.018,Data,https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-7345/
10.1161/CIRCRESAHA.118.314601,,
10.1038/s41588-019-0477-9,Data,https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE108390
10.1038/s41588-019-0477-9,Code,https://github.com/epigen/baf-complex
10.1038/s41588-019-0413-z,Data,https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105786
10.1038/s41588-019-0413-z,Code,https://github.com/epigen/mthfd1
10.1038/s41589-018-0205-2,PDF,https://www.nature.com/articles/s41589-018-0205-2.epdf?author_access_token=bhLY62eOUKzMxIek0Lrur9RgN0jAjWel9jnR3ZoTv0OorJZAyhsTHb_lKvE8iHB4D-HCNtQW3iuHJ6rd4yyhVuqSRybOkvDAylqw3Y4ls_TSAbSvsrbyBKCASfcuMe_LYEtnAVhV2dzkOxsLOLffEA%3D%3D
10.1038/s41589-018-0205-2,Data,https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE100672
10.1038/s41589-018-0205-2,Code,https://github.com/epigen/cll-ibrutinib
10.1016/j.stem.2018.06.014,Data,https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE99631
10.1038/nmeth.4177,PDF,https://rdcu.be/oDFf
10.1038/nmeth.4177,Data,https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE81274
10.1038/nmeth.4177,Code,https://github.com/epigen/crop-seq
10.1038/nn.4462,Data,https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE74672
10.1002/hep.28970,,
10.1038/ncomms11938,PDF,https://www.nature.com/ncomms/2016/160627/ncomms11938/pdf/ncomms11938.pdf
10.1038/ncomms11938,Data,https://ega-archive.org/studies/EGAS00001001821
10.1038/ncomms11938,Data,https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE81274
10.1038/ncomms11938,Code,https://github.com/epigen/cll-chromatin
10.1038/nmeth.3542,PDF,https://www.cemm.oeaw.ac.at/fileadmin/img/Research/research/Schmidl_et_al_Nature_Methods_2015.pdf
10.1038/nmeth.3542,Data,https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70482
10.1038/nmeth.3542,Code,https://github.com/epigen/chipmentation
10.1101/gr.162529.113,PDF,https://genome.cshlp.org/content/24/4/639.full.pdf
10.1101/gr.162529.113,Data,https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE46488
10.1101/2020.10.08.331322,Preprint,https://dx.doi.org/10.1101/2020.10.08.331322
10.1101/2020.10.08.331322,Code,https://github.com/pepkit/peppy
10.6084/m9.figshare.884562,Preprint,https://files.figshare.com/1360952/ChIP_chromprep_Oikopleura.pdf