diff --git a/R/plot_functions.R b/R/plot_functions.R index 08697ffe..c084b60c 100644 --- a/R/plot_functions.R +++ b/R/plot_functions.R @@ -2655,9 +2655,9 @@ plot_tsne_pq <- function(physeq, #' @examples #' SRS_curve_pq(data_fungi_mini, #' max.sample.size = 200, -#' rarefy.comparison = TRUE, rarefy.repeats = 5 +#' rarefy.comparison = TRUE, rarefy.repeats = 3 #' ) -#' SRS_curve_pq(data_fungi_mini, max.sample.size = 1000, metric = "shannon") +#' SRS_curve_pq(data_fungi_mini, max.sample.size = 500, metric = "shannon") SRS_curve_pq <- function(physeq, clean_pq = FALSE, ...) { if (clean_pq) { physeq <- clean_pq(physeq)