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OS return value: -7 #1376

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LaurenceHdL opened this issue Sep 16, 2024 · 1 comment
Open
1 task done

OS return value: -7 #1376

LaurenceHdL opened this issue Sep 16, 2024 · 1 comment

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@LaurenceHdL
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Description of bug

I have one sample that doesn't work this is the error that I don't understand:

== Error == system call for: "['/cvmfs/soft.computecanada.ca/easybuild/software/2023/x86-64-v4/Compiler/gcccore/spades/3.15.4/bin/spades-core', '/lustre04/scratch/lauhotte/norvege/CGVMWSH240419/CGVMWSH240419-48DNA/120623_01_P06/Assembly_120623_01_P06_output/K21/configs/config.info', '/lustre04/scratch/lauhotte/norvege/CGVMWSH240419/CGVMWSH240419-48DNA/120623_01_P06/Assembly_120623_01_P06_output/K21/configs/mda_mode.info', '/lustre04/scratch/lauhotte/norvege/CGVMWSH240419/CGVMWSH240419-48DNA/120623_01_P06/Assembly_120623_01_P06_output/K21/configs/meta_mode.info']" finished abnormally, OS return value: -7
None

spades.log

spades.log

params.txt

params.txt

SPAdes version

SPAdes v.3.15.4

Operating System

Béluga-Compute Canada

Python Version

No response

Method of SPAdes installation

don't know

No errors reported in spades.log

  • Yes
@handesome
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same error

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