schema-36.1

Changes can be found in the Changelog

Schema 36

Revised monitoring code (equivalent functionality). Updated doc of existing functionality.

onlyNewEpisode monitoring option replaces REPORT_ONLY_AT_RISK model option. Both affect many measures simultaneously.

Vector traps intervention.

schema-35.0: Merge pull request #156 from SwissTPH/schema-35

Release schema-35

schema-34-example-test-10

Bump to schema-34-example-test-10

Schema-34 release

Changelog

Installation guide

Milestone Schema-34

Note on Windows builds:

Use the *.dll files included in openMalaria-windows.zip provided if you get errors when starting openMalaria.

Bugfix release for #49

Fixes #49 :

Core Dump on local 32bit linux build?

Some corrections to PKPD

• Refactored some code to be more readable
• Added a temporary correctional factor for metabolite quantity calculation in the conversion model, to match AS unittests.
• Disabled Cloroquine unittest ( Needs fixing #118 )

Find the corresponding XSD here: scenario_34.xsd

schema-34-develop-2

Bump to version schema-34-develop-2

Vivax-update: Linux builds

This schema-34 pre-release contains the new vivax updates.

See test/scenarioVivax.xml for a vivax Test scenario.

Alternative scenario with secondRelease distribution specified, from @tph-thuering while developing this: Vivax development test scenario

Download the file below called openMalaria if you have ubuntu or a debian distribution.
Download openMalaria-maia-schema-34-vivax-bloodstage-update-3.tar.gzbelow if you are a maia user.

Automated OS X & Windows builds will come soon too.

Maia-users:

Use the archive openMalaria-maia-schema-34-vivax-bloodstage-update-3.tar.gz, which contains:

• readme.txt
• openMalaria (specifically built on a maia node)
• scenario_34.xsd (pre-release version, do not use for anything else)
• densities.csv
• autoRegressionParameters.csv

Permissions are set for my maia-user, you might need to adjust them.

mkdir MY_OPENMALARIA_DIR && cd MY_OPENMALARIA_DIR
chown -v `whoami` *

Troubleshooting

Please comment here and mention @tph-thuering:

• #126: When you think the model needs tweaks
• #87: for errors when getting errors related to libraries (this is fixed now, but we'll see 🙏 )
  or just write an email to me.

Semantic versioning update

This release gives identifiable builds for openMalaria and enables us to cite it with DOI in the future.

With the --version switch there is now a schema-version and a program-version.
For details read the Developer Guide