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[Bug]: Type status does not include taxon name just status in DWC #4160

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bpescador opened this issue Dec 20, 2024 · 1 comment
Open

[Bug]: Type status does not include taxon name just status in DWC #4160

bpescador opened this issue Dec 20, 2024 · 1 comment
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bug An existing function is broken.

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@bpescador
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Steps to reproduce the bug

1.CO with type status added since the release of 46.1 does not have type status+taxon name on DwC export only type status.  
2. For example see: https://sfg.taxonworks.org/tasks/accessions/comprehensive?collection_object_id=2069512

and compare to: https://sfg.taxonworks.org/tasks/accessions/comprehensive?collection_object_id=1688793
3. 
...

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Screenshot 2024-12-20 at 14 25 08 Screenshot 2024-12-20 at 14 22 22

Expected behavior

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@bpescador bpescador added the bug An existing function is broken. label Dec 20, 2024
@bpescador
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@mjy We are a tiny bit closer to understanding the issue with Taxon Names not outputting correctly in DwC. We now understand that there are 3 ways to create new taxon names in TW but only one way will create the desired outcome. The three ways are:

  1. in Comprehensive Determination, if a name is not in the pull down option, you can create a new OTU or new Taxon name
  2. The Data tab Taxon Name: if you create a new Taxon name using this option, the Taxon Name will not be complete. This option does not automatically add "original combination and rank," - which may be the issue.
  3. New Taxon Name from the New Taxon Name Task. This appears to be the only way to correctly create a new taxon name.

We still don't understand why some Taxon Names also appear as OTUs (why you can filter OTUs and find some of the Taxon Names but not all)

It would be helpful to have guidance on how when to use each of the three options for new Taxon Name creation. Also, if we don't want Taxon Names as an OTU, how should we delete them? Or do we just leave them there as an OTU?

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