_pkgdown.yml

template:
  includes:
    in_header: |
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navbar:
   title: "flexsurvPlus"
   left:
    - icon: fa-home
      href: index.html
    - text: "Vignettes"
      href: articles/index.html
    - text: "Functions"
      href: reference/index.html
    - text: "Other Packages"
      menu:
        - text: "Global-HTA-Evidence-Open"
          href: https://roche.github.io/Global-HTA-Evidence-Open/index.html
        - text: "flexsurvPlus"
          href: https://roche.github.io/flexsurvPlus/index.html          
        - text: "gemtcPlus"
          href: https://roche.github.io/gemtcPlus/index.html
        - text: "MAIC"
          href: https://roche.github.io/MAIC/index.html          
        - text: "rpsftmPlus"
          href: https://roche.github.io/rpsftmPlus/index.html
        - text: "descem"
          href: https://roche.github.io/descem/index.html
   right:
    - icon: fa-github
      href: https://github.com/Roche/flexsurvPlus

reference:
- title: "Package information"
  contents:
  - flexsurvPlus
- title: "Core functions"
  desc: >
    These functions are the core functions used to perform survival analysis.
  contents: 
  - runPSM
  - bootPSM
  - summaryPSM
  - summaryKM
- title: "Supporting functions"
  desc: >
    These functions are provided for convinience but are not part of core workflow
  contents:
  - sim_adtte
- title: "STEM appendix"
  desc: >
    These functions are used to convert to parametrizations that were used in a prior SAS 
    macro. For most users these can be safely ignored.
  contents:
  - convSTEM
      
  
articles:
- title: "Introduction"
  desc: >
    These vignettes illustrate how **flexsurvPlus** can be used to prepare inputs in R 
    for inclusion into Excel based economic models.
  contents: 
  - Fitting_models_in_R
  - Bootstrap_models_in_R
- title: "Excel examples"
  desc: >
    These vignettes provide examples using some included Excel files to demonstrate 
    a complete workflow.
  contents:
  - Excel_example_ex1
  - Excel_example_ex3
- title: "Methods appendix"
  desc: >
    These vignettes provide more details on the methods used and formulas for parametric forms
    and related surival and hazard functions.
  contents:
  - Model_theory
- title: "STEM appendix"
  desc: >
    These vignettes describe how to convert to parametrizations that were used in a prior SAS 
    macro. For most users this vignette can be safely ignored.
  contents:
  - STEM_compatibility
  - Excel_example_ex2