Update model diagram

[diatomsRcool]

The model diagram in the documentation is missing some of the newer elements. Is this a bug? Or does some update action need to be run?

[bfurner]

The diagram has been manually created up to this point as there is no LinkML generator to build a model overview diagram that I know of. In particular, I think we want an "overview" diagram that doesn't necessarily show all classes, but just the most meaningful classes. For example, "utility" classes like Quantity or BiologicProduct are probably not necessary in an overview. So what we would like to have is a diagram generator that allows us to supply an array of classes to omit (or conversely an array of classes to include).

[diatomsRcool]

Even this diagram? I though this one was automated.

[bfurner]

Nope the mermaid script was hand-rolled

[diatomsRcool]

OK, let's get this updated. The rest of BDC will want to know.

[bfurner]

if we want to keep this in the documentation going forward, it would be good to have someone write code to automate its creation, otherwise it will invariably get out of date. i know David had mentioned there might be ways to get effort to help on this project. is there a way to find someone to put in some effort on automating this?