From 2178359f884550fc72e9cef9ecb9ccc4606fe09b Mon Sep 17 00:00:00 2001 From: semantic-release-bot Date: Sat, 17 Aug 2024 06:25:44 +0100 Subject: [PATCH] chore(release): 2.15.1 ## [2.15.1](https://github.com/PharmGKB/PharmCAT/compare/v2.15.0...v2.15.1) (2024-08-17) ### Bug Fixes * do not require any base filename before the sample IDs ([7250db4](https://github.com/PharmGKB/PharmCAT/commit/7250db4e5a7812c5c9f99c4f3a542c37aeea711e)) * validate outside call diplotypes ([9c49fbc](https://github.com/PharmGKB/PharmCAT/commit/9c49fbc9ec7a81b8b314956574e59c1fea5ccd40)) * **data:** include missing CPIC metoprolol guidance ([b117835](https://github.com/PharmGKB/PharmCAT/commit/b1178357c05f2b2e9859280a8a801bd3b9630add)) * **subsetter:** fix bugs in subsetter ([683a361](https://github.com/PharmGKB/PharmCAT/commit/683a36100626f8bedbe9aa360adc0d16486e3955)) --- CHANGELOG.md | 10 ++++++++++ dockstore/pipeline/PharmCAT_Pipeline.wdl | 2 +- dockstore/pipeline/README.md | 2 +- docs/index.md | 2 +- package.json | 2 +- preprocessor/preprocessor/common.py | 2 +- 6 files changed, 15 insertions(+), 5 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 77988fde..b4b49e44 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,3 +1,13 @@ +## [2.15.1](https://github.com/PharmGKB/PharmCAT/compare/v2.15.0...v2.15.1) (2024-08-17) + + +### Bug Fixes + +* do not require any base filename before the sample IDs ([7250db4](https://github.com/PharmGKB/PharmCAT/commit/7250db4e5a7812c5c9f99c4f3a542c37aeea711e)) +* validate outside call diplotypes ([9c49fbc](https://github.com/PharmGKB/PharmCAT/commit/9c49fbc9ec7a81b8b314956574e59c1fea5ccd40)) +* **data:** include missing CPIC metoprolol guidance ([b117835](https://github.com/PharmGKB/PharmCAT/commit/b1178357c05f2b2e9859280a8a801bd3b9630add)) +* **subsetter:** fix bugs in subsetter ([683a361](https://github.com/PharmGKB/PharmCAT/commit/683a36100626f8bedbe9aa360adc0d16486e3955)) + ## [2.15.0](https://github.com/PharmGKB/PharmCAT/compare/v2.14.0...v2.15.0) (2024-08-06) diff --git a/dockstore/pipeline/PharmCAT_Pipeline.wdl b/dockstore/pipeline/PharmCAT_Pipeline.wdl index ba6faeb6..a05bf373 100644 --- a/dockstore/pipeline/PharmCAT_Pipeline.wdl +++ b/dockstore/pipeline/PharmCAT_Pipeline.wdl @@ -60,7 +60,7 @@ task pharmcat_pipeline { } runtime { - docker: "pgkb/pharmcat:2.13.0" + docker: "pgkb/pharmcat:2.15.1" memory: max_memory cpu: max_concurrent_processes } diff --git a/dockstore/pipeline/README.md b/dockstore/pipeline/README.md index e48aa93f..b66cfb22 100644 --- a/dockstore/pipeline/README.md +++ b/dockstore/pipeline/README.md @@ -117,7 +117,7 @@ Successfully tested on v53 and v87. ### PharmCAT Version -PharmCAT v2.13.0. +PharmCAT v2.15.1. ## Contact diff --git a/docs/index.md b/docs/index.md index d4076236..63e8dd3a 100644 --- a/docs/index.md +++ b/docs/index.md @@ -3,7 +3,7 @@ title: Home permalink: / nav_order: 1 # version is dynamically updated - DO NOT MODIFY MANUALLY -pharmcat_version: 2.15.0 +pharmcat_version: 2.15.1 --- # PharmCAT:
Pharmacogenomics Clinical Annotation Tool diff --git a/package.json b/package.json index 7464f92a..3ed686c4 100644 --- a/package.json +++ b/package.json @@ -1,6 +1,6 @@ { "name": "pharmcat", - "version": "2.15.0", + "version": "2.15.1", "repository": { "type": "git", "url": "https://github.com/PharmGKB/PharmCAT.git" diff --git a/preprocessor/preprocessor/common.py b/preprocessor/preprocessor/common.py index 50fa0e99..3594e7e4 100644 --- a/preprocessor/preprocessor/common.py +++ b/preprocessor/preprocessor/common.py @@ -2,7 +2,7 @@ # version is dynamically updated - DO NOT MODIFY MANUALLY -PHARMCAT_VERSION = '2.15.0' +PHARMCAT_VERSION = '2.15.1' # expected tool versions MIN_BCFTOOLS_VERSION = '1.18'