diff --git a/.github/workflows/database-update.yml b/.github/workflows/database-update.yml index 6f66a87..95be670 100644 --- a/.github/workflows/database-update.yml +++ b/.github/workflows/database-update.yml @@ -10,12 +10,6 @@ on: # Allows you to run this workflow manually from the Actions tab workflow_dispatch: -# Sets permissions of the GITHUB_TOKEN to allow deployment to GitHub Pages -permissions: - contents: write - pages: write - id-token: write - jobs: # Placeholder # build-bmd: @@ -67,13 +61,13 @@ jobs: run: ls -la - name: Copy files to artifact run: | - mkdir expo-files - mv /tmp/sigGeneStats.csv expo-files + mkdir expo-files + mv /tmp/sigGeneStats.csv expo-files - name: upload artifact uses: actions/upload-artifact@v2 - with: - name: expo-files - path: expo-files + with: + name: expo-files + path: expo-files build-expr: #if: github.actor != 'github-actions[bot]' @@ -90,13 +84,13 @@ jobs: docker run -v $PWD:/tmp sgosline/srp-zfexp - name: Copy files to artifact run: | - mkdir exp-files - mv /tmp/*csv expr-files + mkdir exp-files + mv /tmp/*csv expr-files - name: upload artifact uses: actions/upload-artifact@v2 - with: - name: expr-files - path: expr-files + with: + name: expr-files + path: expr-files artifact-test: needs: [build-samples,build-expo,build-expr] @@ -108,7 +102,7 @@ jobs: uses: actions/download-artifact@v2 with: name: expr-files - name: expo-files + name: expo-files - name: List files cwd run: ls -lah #zipfiles push to figshare