DESCRIPTION

Package: secr
Type: Package
Title: Spatially Explicit Capture-Recapture
Version: 5.2.0
Date: 2025-01-07
Description: Functions to estimate the density and size of a spatially 
  distributed animal population sampled with an array of passive detectors, 
  such as traps, or by searching polygons or transects. Models incorporating 
  distance-dependent detection are fitted by maximizing the likelihood. 
  Tools are included for data manipulation and model selection.
Authors@R: c(person("Murray", "Efford", 
    email = "murray.efford@otago.ac.nz", 
    role = c("aut","cre"), 
    comment = c(ORCID = "0000-0001-5231-5184")),
    person("Philipp", "Jund", 
    role = "ctb",
    comment = "faster transect search and spacing"),
    person("David", "Fletcher",
    role = "ctb",
    comment = "overdispersion"),
    person("Yan Ru", "Choo",
    role = "ctb",
    comment = c(ORCID = "0000-0002-8852-7178", "goodness-of-fit"))
    )
Depends: 
    R (>= 3.5.0), 
    methods
Imports: 
    abind, 
    graphics, 
    grDevices, 
    MASS, 
    mgcv, 
    mvtnorm,
    nlme, 
    parallel, 
    raster (>= 3.5-15), 
    Rcpp (>= 0.12.14), 
    RcppNumerical,
    RcppParallel (>= 5.1.1),
    sf,
    stats, 
    stringr, 
    terra (>= 1.5-12), 
    tools, 
    utils
Suggests: 
    gdistance, 
    igraph,
    knitr, 
    readxl, 
    rmarkdown, 
    sp, 
    spatstat (>= 3.0-2),
    spatstat.geom,
    spatstat.random,
    spcosa,
    spsurvey (>= 5.3.0),
    testthat
LinkingTo: 
    BH,
    Rcpp, 
    RcppEigen, 
    RcppNumerical, 
    RcppParallel
VignetteBuilder: knitr
License: GPL (>= 2)
LazyData: yes
LazyDataCompression: xz
SystemRequirements: GNU make
URL: https://www.otago.ac.nz/density/, https://github.com/MurrayEfford/secr/