bayesembler4.json

{
	"name": "rb-Bayesembler",
	"parallelism": "SERIAL",
	"version": "1.2.0",
	"revision": 2,
	"helpURI": "http://bioinformatics-centre.github.io/bayesembler/",
	"label": "Bayesembler",
	"shortDescription": "bayesian transcriptome assembler",
	"longDescription": "transcript assembler for ref-based assembly.",
	"author": "Roger Barthelson",
	"datePublished": "06/01/16",
	"tags": [
		"assembler",
		"NGS",
		"Illumina",
		"Bayesian",
		"transcript"
	],
	"ontology": [
		"http://sswapmeet.sswap.info/sequenceServices/SequenceServices"
	],
	"defaultMaxRunTime": "47:56:00",
	"defaultQueue": "normal",
	"defaultNodeCount": 1,
	"defaultMemoryPerNode": 64,
	"defaultProcessorsPerNode": 24,
	"executionHost": "rogerab-starland",
	"executionSystem": "rogerab-starland",
	"executionType": "HPC",
	"deploymentPath": "rogerab/applications/bayesembler-1.2/bin",
	"templatePath": "bayes_wrapper3.sh",
	"testPath": "../test/bayes_wrapper2.sh",
	"checkpointable": true,
	"modules": [
		"purge",
		"load TACC",
		"load samtools/1.3"
	],
	"inputs": [{
		"id": "prBam1",
		"value": {
			"default": "",
			"validator": "",
			"visible": true,
			"required": false,
			"order": 1
		},