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setup.py
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from setuptools import setup, find_packages
setup(name='gnomad_db',
version='0.1.4',
description='This package scales the huge gnomAD files to a SQLite database, which is easy and fast to query. It extracts from a gnomAD vcf the minor allele frequency for each variant.',
author='KalinNonchev',
author_email='[email protected]',
license='MIT License',
long_description_content_type='text/markdown',
long_description=open('README.md').read(),
url="https://github.com/KalinNonchev/gnomAD_DB",
packages=find_packages(), # find packages
package_data={
"gnomad_db": ["pkgdata/*"], # include pkgdata into package
},
include_package_data=True,
install_requires=['pandas', 'numpy', 'joblib', 'tqdm', 'pyyaml'], # external packages as dependencies,
python_requires='>=3.6'
)