From 4dab110ee2616caa9070aba922bb906c2b984079 Mon Sep 17 00:00:00 2001 From: Ziv Yaniv Date: Wed, 18 Sep 2024 20:53:33 -0400 Subject: [PATCH] Manually update code urls. Relative references in the original notebooks to other notebooks and scripts need to be manually updated to point to the static html. --- Python_html/04_Image_Display.html | 2 +- Python_html/05_Results_Visualization.html | 2 +- Python_html/21_Transforms_and_Resampling.html | 2 +- Python_html/34_Segmentation_Evaluation.html | 2 +- Python_html/61_Registration_Introduction_Continued.html | 2 +- Python_html/65_Registration_FFD.html | 2 +- Python_html/70_Data_Augmentation.html | 2 +- Python_html/71_Trust_But_Verify.html | 4 ++-- 8 files changed, 9 insertions(+), 9 deletions(-) diff --git a/Python_html/04_Image_Display.html b/Python_html/04_Image_Display.html index 0020d96c..28706237 100644 --- a/Python_html/04_Image_Display.html +++ b/Python_html/04_Image_Display.html @@ -7550,7 +7550,7 @@

Image Display No description has been provided for this image

The native SimpleITK approach to displaying images is to use an external viewing program. In the notebook environment it is convenient to use matplotlib to display inline images and if the need arises we can implement some reasonably rich inline graphical user interfaces, combining control components from the ipywidgets package and matplotlib based display.

-

In this notebook we cover the usage of external programs and matplotlib for viewing images. We also instantiate a more involved inline interface that uses ipywidgets to control display. For the latter type of moderately complex display, used in many of the notebooks, take a look at the gui.py file.

+

In this notebook we cover the usage of external programs and matplotlib for viewing images. We also instantiate a more involved inline interface that uses ipywidgets to control display. For the latter type of moderately complex display, used in many of the notebooks, take a look at the gui.py file.

diff --git a/Python_html/05_Results_Visualization.html b/Python_html/05_Results_Visualization.html index 76a137fb..641f45f7 100644 --- a/Python_html/05_Results_Visualization.html +++ b/Python_html/05_Results_Visualization.html @@ -7558,7 +7558,7 @@

Visualization of Segmentation and Registration Results CastImageFilter -
  • ResampleImageFilter, one of the more important filters in your toolbox, see this notebook for additional usage details.
    • +
  • ResampleImageFilter, one of the more important filters in your toolbox, see this notebook for additional usage details.
  • TileImageFilter
  • CheckerBoardImageFilter
  • ComposeImageFilter
    • diff --git a/Python_html/21_Transforms_and_Resampling.html b/Python_html/21_Transforms_and_Resampling.html index 30d4a2a5..471bcc67 100644 --- a/Python_html/21_Transforms_and_Resampling.html +++ b/Python_html/21_Transforms_and_Resampling.html @@ -7773,7 +7773,7 @@

    Creating and Manipulating Transfor diff --git a/Python_html/34_Segmentation_Evaluation.html b/Python_html/34_Segmentation_Evaluation.html index 50a7d38f..09307fde 100644 --- a/Python_html/34_Segmentation_Evaluation.html +++ b/Python_html/34_Segmentation_Evaluation.html @@ -7571,7 +7571,7 @@

    Segmentation Evaluation -

    Note: The approach described here can also be used to evaluate Registration, as illustrated in the free form deformation notebook.

    +

    Note: The approach described here can also be used to evaluate Registration, as illustrated in the free form deformation notebook.

    Recommended read: A community effort describing limitations of various evaluation metrics, A. Reinke et al., "Common Limitations of Image Processing Metrics: A Picture Story", available from arxiv (PDF).

    diff --git a/Python_html/61_Registration_Introduction_Continued.html b/Python_html/61_Registration_Introduction_Continued.html index 25451d5e..27f741af 100644 --- a/Python_html/61_Registration_Introduction_Continued.html +++ b/Python_html/61_Registration_Introduction_Continued.html @@ -7549,7 +7549,7 @@ diff --git a/Python_html/70_Data_Augmentation.html b/Python_html/70_Data_Augmentation.html index 6be7250e..645f4453 100644 --- a/Python_html/70_Data_Augmentation.html +++ b/Python_html/70_Data_Augmentation.html @@ -8571,7 +8571,7 @@

    Radial Distortion diff --git a/Python_html/71_Trust_But_Verify.html b/Python_html/71_Trust_But_Verify.html index 20a2e6ed..f6768a76 100644 --- a/Python_html/71_Trust_But_Verify.html +++ b/Python_html/71_Trust_But_Verify.html @@ -7548,7 +7548,7 @@