v0.1.21

What's Changed

• Added kgcl as dependency. by @hrshdhgd in #92
• Additional documentation and fixed script name for og2dot by @cmungall in #95
• Anchor sssom version by @hrshdhgd in #96

Full Changelog: v0.1.20...v0.1.21

v0.1.20

What's Changed

• Delete init.py by @cthoyt in #87
• Tidy up tutorials by @deepakunni3 in #89
• various changes by @cmungall in #91

New Contributors

• @cthoyt made their first contribution in #87
• @deepakunni3 made their first contribution in #89

Full Changelog: v0.1.19...v0.1.20

v0.1.19

What's Changed

• Fix zenodo badge by @cmungall in #85
• Adding a few boilerplate examples to programming tutorial by @matentzn in #84
• Boolean search support, plus additional datamodel changes by @cmungall in #86

New Contributors

• @matentzn made their first contribution in #84

Full Changelog: v0.1.18...v0.1.19

v0.1.18

What's Changed

• Fix CLI examples by @cmungall in #80 fixes #78 from @joeflack4
• Adding ability to include MRCAs in viz prior to gap-fill step. Additional tests for MRCA methods by @cmungall in #81

Example:

runoak -i $db/cl.db viz --add-mrcas  --gap-fill -p i CL:0000540 CL:0000084 CL:0000235 CL:0000653

Full Changelog: v0.1.17...v0.1.18

v0.1.17

What's Changed

• Adding phenodigm score to SemSim datamodel and ubergraph implementation. by @cmungall in #76
• added linkml based docs in gh-action workflow by @hrshdhgd in #75
• additional sqlite tests by @cmungall in #77

Full Changelog: v0.1.16...v0.1.17

v0.1.16

What's Changed

• Issue 40 by @hrshdhgd in #70
• Enrichment nb by @realmarcin in #67
• Allow BioPortal search to be limited to one ontology by @pkalita-lbl in #71
• Adding agroportal implementation. Added ability to dynamically make sqlite from owl. Added query datamodel. Various documentation. Added LOV implementation by @cmungall in #72

New Contributors

• @realmarcin made their first contribution in #67

Full Changelog: v0.1.15...v0.1.16

v0.1.15

What's Changed

• fix docs on cli input arg by @cmungall in #66
• Adding migrate_curies operation @cmungall in #69

Full Changelog: v0.1.14...v0.1.15

v0.1.14

What's Changed

• Taxon constraints; multi-ontology arguments by @cmungall in #19
• taxon constraints by @cmungall in #20
• mappings by @cmungall in #22
• poetry update + tested workflow for sphinx deployment in gh-pages by @hrshdhgd in #23
• just added . to statements by @hrshdhgd in #24
• completed URI definition. by @hrshdhgd in #25
• Adding notebook for CLI examples. Adding tests for reading/writing to/from json and obo; see althonos/pronto#164 by @cmungall in #28
• gap filling by @cmungall in #35
• Added markdown tree as export options. Adding semsim implementation. Additional docs by @cmungall in #36
• Refactored search by @cmungall in #42
• search docs by @cmungall in #43
• Change label to lbl, fixes #26 by @cmungall in #45
• Update main.yaml by @cmungall in #47
• Add missing param flag for set-apikey in tutorial by @caufieldjh in #50
• use rdflib sparql by @cmungall in #51
• Fixing missing OWL label as alias bug, see #52 by @cmungall in #53
• Updates to BioportalImplementation to support use in mapping-walker by @pkalita-lbl in #57
• Adding OMK by @cmungall in #54
• additional OMK functionality by @cmungall in #58
• documentation for proposed cross-ontology diff datamodel by @cmungall in #59
• fixing too-rigid UG test by @cmungall in #62
• fixing CLI docs by @cmungall in #63

New Contributors

• @caufieldjh made their first contribution in #50

Full Changelog: v0.1.7...v0.1.14

v0.1.13

What's Changed

• Updates to BioportalImplementation to support use in mapping-walker by @pkalita-lbl in #57
• Adding OMK by @cmungall in #54

Full Changelog: v0.1.12...v0.1.13

v0.1.12

What's Changed

• Fixing missing OWL label as alias bug, see #52 from @realmarcin by @cmungall in #53

Full Changelog: v0.1.11...v0.1.12