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Galaxy Tool wrapper for UNAFold

This is the Galaxy wrapper for the UNAFold. UNAFold software was developed for nucleic acid folding and hybridization prediction (doi: 10.1007/978-1-60327-429-6_1, doi: 10.1093/nar/gki591).

Installation

  • Save UNAFold.pl in your $PATH, that is accesable to the Galaxy.

  • Create the directory unafold in $GALAXY_DIR/tools/ and copy unafold.xml and unafold.sh files into it.

  • Add the Galaxy tool definition to the tools_conf.xml:

    <section id="unafold_tool" name="UNAFold">
        <tool file="unafold/unafold.xml" />
    </section>`
  • Please, be sure that zip datatype is registered in your Galaxy instance. If not, add the following string to the datatypes_conf.xml file:
    <datatype extension="zip" type="galaxy.datatypes.binary:Binary" mimetype="application/zip" subclass="True" />
  • Reload the Galaxy instance.