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Set mt files as non mandatory #129

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jemten opened this issue Jan 10, 2025 · 0 comments
Open

Set mt files as non mandatory #129

jemten opened this issue Jan 10, 2025 · 0 comments

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@jemten
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jemten commented Jan 10, 2025

For exome samples there won't be any calls on the mitochondria with the current setup. Thus no ranked vcfs will be generated for and these files should be set as on-mandatory.

frozenset(["rank_and_filter", "mt_clinical"]): {

The raw calls are already non-mandatory

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