- Priebe 1998 (lr2, lr1)
- Seemann 2003
- Kurata 2005
- Iyer 2004 (Winslow 1999, Jafri 1998)
- Iyer 2007
- Ten Tusscher 2004 (lr2?)
- Ten Tusscher 2006
- Fink 2008
- Moreno 2011
- Balakina-Vikulova 2020
- Grandi 2009
- Ten Tusscher 2006
- Grandi 2010 (Shannon 2004, Puglisi 2001)
- Carro 2011
- Asakura 2014
- Himeno 2015 (contains iterative routine to find equilibrium)
- O'Hara 2011 (livshitz 2009, Hund 2004)
- Yang 2012
- Fogli Iseppe 2021 (sex)
- Passini 2016
- Li 2017
- Dutta 2017
- Bartolucci 2020
- Bartolucci 2022 (Contraction)
- Bartolucci 2020
- Dutta 2017
- Tomek 2019
- Tomek 2020
- Doste 2022 (BARS)
- Tomek 2020
- Yang 2012
- Courtemanche 1998 (lr2, lr1)
- Colman 2013
- Colman 2017
- Ni 2017
- Colman 2017
- Aguilar 2017
- Colman 2013
- Nygren 1998 (lindblad 1996, demir 1994)
- Maleckar 2009
- Koivumaki 2011
- Mahzar 2022 (contraction)
- Grandi-Pandit-Voigt 2011 (grandi 2010, shannon 2004)
- Voigt-Heijman 2013
- Schmidt 2015
- Chang 2014
- Morotti 2016
- Ellinwood 2017
- Herrera 2023
- Ni 2023 (BARS)
- Ellinwood 2017
- Heijman 2023
- Voigt-Heijman 2013
- Bai 2018 (ten tusscher 2006)
- Ten Tusscher 2008 (ten tusscher 2006 with two conductances changed)
- Stewart 2009 (ten tusscher 2006, 2004)
- Sampson 2010 (iyer 2004, winslow 1999)
- Trovato 2020 (ohara 2011, livshitz 2009)
- Pohl 2016 (Dokos 1996, Wilders 1991) (no code, missing info)
- Fabbri 2017 (Severi 2012, Maltsev 2009)
- Loewe 2019
- Hoekstra 2021
- Paci 2013 (Paci 2012, Grandi 2009)
- Paci 2015
- Paci 2017
- Paci 2018
- Paci 2020
- Botti 2024
- Paci 2020
- Paci 2018
- Paci 2017
- Paci 2015
- Koivumaki 2018 (korhonen 2010 & paci 2015)
- Kernik 2019 (Shannon 2004 & Ten tusscher 2004 & Maltsev 2009)
- Akwaboah 2021 (kurata 2002 & courtemanche 1998)
- Kojitani 2022 (Himeno 2015, asakura 2014)