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DESCRIPTION
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Package: rCRUX
Title: Generate CRUX metabarcoding reference libraries in R
Version: 0.1.0.000
Authors@R:
person(given = "Luna",
family = "Gal",
role = c("aut"))
person(given = "Zack",
family = "Gold",
role = c("aut"),
comment = c(ORCID = "0000-0003-0490-7630"))
person(given = "Shaun",
family = "Nielsen",
role = c("aut"))
person(given = "Ramon",
family = "Gallego",
role = c("aut"))
person(given = "Shaun",
family = "Nielsen",
role = c("aut"))
person(given = "Emily",
family = "Curd",
role = c("aut", "cre"),
email = "[email protected]",
comment = c(ORCID = "0000-0003-0336-6852"))
Description: rCRUX is a Suite of Tools for Building environmental DNA (eDNA) Metabarcode Reference Libraries by Querying NCBI Databases and Filtering and Formatting the Resulting Data.
License: GPL-3
biocViews:
Imports:
tibble,
dplyr,
magrittr,
taxonomizr,
data.table,
tidyr,
stringr,
lubridate,
progress,
zoo,
readr,
XML,
httr,
plyr,
phylotools,
rlang,
purrr,
utils,
ggVennDiagram,
psadd,
phyloseq,
ggplot2
Remotes:
cpauvert/psadd
Encoding: UTF-8
#LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
Suggests:
knitr,
rmarkdown,
testthat (>= 3.0.0)
VignetteBuilder: knitr
Config/testthat/edition: 3