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environment.yml
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name: "QT-UNet"
channels:
- simpleitk
- pytorch
- defaults
- conda-forge
dependencies:
- _libgcc_mutex=0.1=main
- _openmp_mutex=4.5=1_gnu
- absl-py=0.15.0=pyhd3eb1b0_0
- aiohttp=3.8.1=py39h7f8727e_1
- aiosignal=1.2.0=pyhd3eb1b0_0
- async-timeout=4.0.1=pyhd3eb1b0_0
- attrs=21.4.0=pyhd3eb1b0_0
- autopep8=1.6.0=pyhd3eb1b0_0
- black=19.10b0=py_0
- blas=1.0=mkl
- blinker=1.4=py39h06a4308_0
- brotli=1.0.9=he6710b0_2
- brotlipy=0.7.0=py39h27cfd23_1003
- bzip2=1.0.8=h7b6447c_0
- c-ares=1.18.1=h7f8727e_0
- ca-certificates=2021.10.8=ha878542_0
- cached-property=1.5.2=hd8ed1ab_1
- cached_property=1.5.2=pyha770c72_1
- cachetools=4.2.2=pyhd3eb1b0_0
- certifi=2021.10.8=py39hf3d152e_2
- cffi=1.15.0=py39hd667e15_1
- charset-normalizer=2.0.4=pyhd3eb1b0_0
- click=8.0.4=py39h06a4308_0
- colorama=0.4.4=pyhd3eb1b0_0
- cryptography=3.4.8=py39hd23ed53_0
- cudatoolkit=11.3.1=h2bc3f7f_2
- cycler=0.11.0=pyhd3eb1b0_0
- dataclasses=0.8=pyh6d0b6a4_7
- dbus=1.13.18=hb2f20db_0
- dicom2nifti=2.3.2=pyhd3deb0d_0
- expat=2.4.4=h295c915_0
- ffmpeg=4.2.2=h20bf706_0
- fontconfig=2.13.1=h6c09931_0
- fonttools=4.25.0=pyhd3eb1b0_0
- freetype=2.11.0=h70c0345_0
- frozenlist=1.2.0=py39h7f8727e_0
- fsspec=2022.2.0=pyhd3eb1b0_0
- future=0.18.2=py39h06a4308_1
- giflib=5.2.1=h7b6447c_0
- glib=2.69.1=h4ff587b_1
- gmp=6.2.1=h2531618_2
- gnutls=3.6.15=he1e5248_0
- google-auth=2.6.0=pyhd3eb1b0_0
- google-auth-oauthlib=0.4.1=py_2
- grpcio=1.42.0=py39hce63b2e_0
- gst-plugins-base=1.14.0=h8213a91_2
- gstreamer=1.14.0=h28cd5cc_2
- h5py=3.2.1=nompi_py39h98ba4bc_100
- hdf5=1.10.6=nompi_h3c11f04_101
- icu=58.2=he6710b0_3
- idna=3.3=pyhd3eb1b0_0
- importlib-metadata=4.11.3=py39h06a4308_0
- intel-openmp=2021.4.0=h06a4308_3561
- jpeg=9d=h7f8727e_0
- kiwisolver=1.3.2=py39h295c915_0
- lame=3.100=h7b6447c_0
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.35.1=h7274673_9
- libffi=3.3=he6710b0_2
- libgcc-ng=9.3.0=h5101ec6_17
- libgfortran-ng=7.5.0=h14aa051_20
- libgfortran4=7.5.0=h14aa051_20
- libgomp=9.3.0=h5101ec6_17
- libidn2=2.3.2=h7f8727e_0
- libopus=1.3.1=h7b6447c_0
- libpng=1.6.37=hbc83047_0
- libprotobuf=3.19.1=h4ff587b_0
- libstdcxx-ng=9.3.0=hd4cf53a_17
- libtasn1=4.16.0=h27cfd23_0
- libtiff=4.2.0=h85742a9_0
- libunistring=0.9.10=h27cfd23_0
- libuuid=1.0.3=h7f8727e_2
- libuv=1.40.0=h7b6447c_0
- libvpx=1.7.0=h439df22_0
- libwebp=1.2.2=h55f646e_0
- libwebp-base=1.2.2=h7f8727e_0
- libxcb=1.14=h7b6447c_0
- libxml2=2.9.12=h03d6c58_0
- lz4-c=1.9.3=h295c915_1
- markdown=3.3.4=py39h06a4308_0
- matplotlib=3.4.3=py39hf3d152e_2
- matplotlib-base=3.4.3=py39hbbc1b5f_0
- mkl=2021.4.0=h06a4308_640
- mkl-service=2.4.0=py39h7f8727e_0
- mkl_fft=1.3.1=py39hd3c417c_0
- mkl_random=1.2.2=py39h51133e4_0
- multidict=5.2.0=py39h7f8727e_2
- munkres=1.1.4=py_0
- mypy_extensions=0.4.3=py39h06a4308_1
- ncurses=6.3=h7f8727e_2
- nettle=3.7.3=hbbd107a_1
- numpy=1.21.2=py39h20f2e39_0
- numpy-base=1.21.2=py39h79a1101_0
- oauthlib=3.2.0=pyhd3eb1b0_0
- openh264=2.1.1=h4ff587b_0
- openssl=1.1.1n=h7f8727e_0
- packaging=21.3=pyhd3eb1b0_0
- pathspec=0.7.0=py_0
- pcre=8.45=h295c915_0
- pillow=9.0.1=py39h22f2fdc_0
- pip=21.2.4=py39h06a4308_0
- protobuf=3.19.1=py39h295c915_0
- pyasn1=0.4.8=pyhd3eb1b0_0
- pyasn1-modules=0.2.8=py_0
- pycodestyle=2.8.0=pyhd3eb1b0_0
- pycparser=2.21=pyhd3eb1b0_0
- pydicom=2.3.0=pyh6c4a22f_0
- pyjwt=2.1.0=py39h06a4308_0
- pyopenssl=20.0.1=pyhd8ed1ab_0
- pyparsing=3.0.4=pyhd3eb1b0_0
- pyqt=5.9.2=py39h2531618_6
- pysocks=1.7.1=py39h06a4308_0
- python=3.9.11=h12debd9_2
- python-dateutil=2.8.2=pyhd3eb1b0_0
- python_abi=3.9=2_cp39
- pytorch=1.11.0=py3.9_cuda11.3_cudnn8.2.0_0
- pytorch-lightning=1.6.0=pyhd8ed1ab_0
- pytorch-mutex=1.0=cuda
- pyyaml=6.0=py39h7f8727e_1
- qt=5.9.7=h5867ecd_1
- readline=8.1.2=h7f8727e_1
- regex=2022.3.15=py39h7f8727e_0
- requests=2.27.1=pyhd3eb1b0_0
- requests-oauthlib=1.3.0=py_0
- rsa=4.7.2=pyhd3eb1b0_1
- simpleitk=2.1.1=py39h3fd9d12_0
- sip=4.19.13=py39h295c915_0
- six=1.16.0=pyhd3eb1b0_1
- sqlite=3.38.2=hc218d9a_0
- tensorboard=2.6.0=py_1
- tensorboard-data-server=0.6.0=py39hca6d32c_0
- tensorboard-plugin-wit=1.6.0=py_0
- tk=8.6.11=h1ccaba5_0
- toml=0.10.2=pyhd3eb1b0_0
- torchaudio=0.11.0=py39_cu113
- torchmetrics=0.7.3=pyhd8ed1ab_0
- torchvision=0.12.0=py39_cu113
- tornado=6.1=py39h27cfd23_0
- tqdm=4.63.0=pyhd3eb1b0_0
- typed-ast=1.4.3=py39h7f8727e_1
- typing-extensions=4.1.1=hd3eb1b0_0
- typing_extensions=4.1.1=pyh06a4308_0
- tzdata=2022a=hda174b7_0
- urllib3=1.26.8=pyhd3eb1b0_0
- werkzeug=2.0.3=pyhd3eb1b0_0
- wheel=0.37.1=pyhd3eb1b0_0
- x264=1!157.20191217=h7b6447c_0
- xz=5.2.5=h7b6447c_0
- yaml=0.2.5=h7b6447c_0
- yarl=1.6.3=py39h27cfd23_0
- zipp=3.7.0=pyhd3eb1b0_0
- zlib=1.2.11=h7f8727e_4
- zstd=1.4.9=haebb681_0
- pip:
- appdirs==1.4.4
- cityscapesscripts==2.2.0
- coloredlogs==15.0.1
- decorator==4.4.2
- einops==0.4.0
- humanfriendly==10.0
- imageio==2.16.1
- imageio-ffmpeg==0.4.5
- itk==5.2.1.post1
- itk-core==5.2.1.post1
- itk-filtering==5.2.1.post1
- itk-io==5.2.1.post1
- itk-numerics==5.2.1.post1
- itk-registration==5.2.1.post1
- itk-segmentation==5.2.1.post1
- joblib==1.1.0
- lightning-bolts==0.5.0
- monai==0.8.1
- moviepy==1.0.3
- nibabel==3.2.1
- pandas==1.4.0
- proglog==0.1.9
- pydeprecate==0.3.1
- pyquaternion==0.9.9
- pytorch-ranger==0.1.1
- pytz==2021.3
- pyyaml-include==1.2.post2
- scipy==1.8.0
- setuptools==59.5.0
- tensorboardx==2.5
- timm==0.5.4
- torch-optimizer==0.3.0
- torch-tb-profiler==0.3.1
- typing==3.7.4.3
prefix: /home/$USER/miniconda3/envs/QT-UNet