From 9fa1964dcdc127ef1f094f88725e44898eb00439 Mon Sep 17 00:00:00 2001 From: yqiqichen <s2459130@ed.ac.uk> Date: Mon, 20 May 2024 09:18:07 +0100 Subject: [PATCH] Modify BurrowsWheelerLibrary.py --- src/alphaimpute2/Imputation/BurrowsWheelerLibrary.py | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/src/alphaimpute2/Imputation/BurrowsWheelerLibrary.py b/src/alphaimpute2/Imputation/BurrowsWheelerLibrary.py index ae55132..7557127 100644 --- a/src/alphaimpute2/Imputation/BurrowsWheelerLibrary.py +++ b/src/alphaimpute2/Imputation/BurrowsWheelerLibrary.py @@ -59,6 +59,10 @@ def removeMissingValues(self): def setup_library(self, loci=None, create_reverse_library=False, create_a=False): self.removeMissingValues() self.haplotypes = np.array(self.haplotypes) + + if self.haplotypes.size == 0: + return + if loci is not None: bw_loci = np.array(loci, dtype=np.int64) sub_library = self.haplotypes[:, bw_loci]