Modify/explore clustering for Wilms tumor annotation (SCPCP000014)

[JingxuanChen7]

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#628

Describe the goals of the changes to the analysis module.

The goal in this section is to explore and improve the clustering for Wilms tumor samples in SCPCP000014.

• I tried an alternative feature selection method SAM
• I utilized the clustering function in this repo calculate-clusters.R.
• I explored clustering by looking at anchor transfer results I generated before.

What will your pull request contain?

R script to run SAM algorithm across 10 samples.
R markdown to explore clustering.

Will you require additional software beyond what is already in the analysis module?

SAM and its dependencies, which would be installed in a conda environment.

Will you require different computational resources beyond what the analysis module already uses?

No.

If known, when do you expect to file the pull request?

This section depends on results generated from anchor transfer. I would create a PR as soon as #836 is merged.