diff --git a/.github/workflows/test_and_deploy.yml b/.github/workflows/test_and_deploy.yml new file mode 100644 index 0000000..ac75e14 --- /dev/null +++ b/.github/workflows/test_and_deploy.yml @@ -0,0 +1,91 @@ +# This workflows will upload a Python Package using Twine when a release is created +# For more information see: https://help.github.com/en/actions/language-and-framework-guides/using-python-with-github-actions#publishing-to-package-registries + +name: test and deploy + +on: + push: + branches: + - main + tags: + - "v*" # Push events to matching v*, i.e. v1.0, v20.15.10 + pull_request: + branches: + - main + workflow_dispatch: + +jobs: + test: + name: ${{ matrix.platform }} py${{ matrix.python-version }} + runs-on: ${{ matrix.platform }} + strategy: + matrix: +# platform: [ubuntu-latest, windows-latest] # , macos-latest + platform: [ubuntu-latest] + python-version: ['3.8', '3.9'] #issues with monai and 3.10; pausing for now. users should use python 3.9 + + steps: + - uses: actions/checkout@v3 + + - name: Set up Python ${{ matrix.python-version }} + uses: actions/setup-python@v4 + with: + python-version: ${{ matrix.python-version }} + +# these libraries enable testing on Qt on linux + - uses: tlambert03/setup-qt-libs@v1 + +# strategy borrowed from vispy for installing opengl libs on windows + - name: Install Windows OpenGL + if: runner.os == 'Windows' + run: | + git clone --depth 1 https://github.com/pyvista/gl-ci-helpers.git + powershell gl-ci-helpers/appveyor/install_opengl.ps1 + if (Test-Path -Path "C:\Windows\system32\opengl32.dll" -PathType Leaf) {Exit 0} else {Exit 1} + +# note: if you need dependencies from conda, considering using +# setup-miniconda: https://github.com/conda-incubator/setup-miniconda +# and +# tox-conda: https://github.com/tox-dev/tox-conda + - name: Install dependencies + run: | + python -m pip install --upgrade pip + python -m pip install setuptools tox tox-gh-actions + python -m pip install napari_cellseg3d + +# this runs the platform-specific tests declared in tox.ini + - name: Test with tox + uses: GabrielBB/xvfb-action@v1 # aganders3/headless-gui@v1 + with: + run: python -m tox + env: + PLATFORM: ${{ matrix.platform }} + + - name: Coverage + uses: codecov/codecov-action@v2 + + deploy: +# this will run when you have tagged a commit, starting with "v*" +# and requires that you have put your twine API key in your +# github secrets (see readme for details) + needs: [test] + runs-on: ubuntu-latest + if: contains(github.ref, 'tags') + steps: + - uses: actions/checkout@v2 + - name: Set up Python + uses: actions/setup-python@v2 + with: + python-version: "3.x" + - name: Install dependencies + run: | + python -m pip install --upgrade pip + pip install -U setuptools setuptools_scm wheel twine build + - name: Build and publish + env: + TWINE_USERNAME: __token__ + TWINE_PASSWORD: ${{ secrets.TWINE_API_KEY }} + run: | + git tag + python -m build . + twine upload dist/*